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L2_057_000M1_scaffold_2755

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_2755_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..131)
DNA (129bp) protein (43aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=2 Tax=Ruminococcus lactaris RepID=B5CR98_9FIRM
L2_057_000M1_scaffold_2755_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(136..687)
DNA (552bp) protein (184aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CR97_9FIRM
L2_057_000M1_scaffold_2755_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(684..1532)
DNA (849bp) protein (283aa)
Ribosome biogenesis GTPase A n=2 Tax=Ruminococcus lactaris RepID=B5CR96_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
ribosome biogenesis GTP-binding protein YlqF
L2_057_000M1_scaffold_2755_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1573..2229)
DNA (657bp) protein (219aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=2 Tax=Ruminococcus lactaris RepID=B5CR95_9FIRM
L2_057_000M1_scaffold_2755_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2372..2719)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=2 Tax=Ruminococcus lactaris RepID=B5CR94_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
ribosomal protein L19, bacterial type
L2_057_000M1_scaffold_2755_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2848..3678)
DNA (831bp) protein (277aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (Guanine(37)-N(1))-methyltransferase n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BRN9_9FIRM
L2_057_000M1_scaffold_2755_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3678..4187)
DNA (510bp) protein (170aa)
Ribosome maturation factor RimM n=2 Tax=Ruminococcus lactaris RepID=B5CR92_9FIRM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
16S rRNA processing protein RimM
L2_057_000M1_scaffold_2755_8
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4345..4572)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BSK5_9FIRM
UPF0109 protein HMPREF1202_02203 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
RNA-binding protein (KH domain)
L2_057_000M1_scaffold_2755_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4603..4848)
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=2 Tax=Ruminococcus lactaris RepID=B5CR89_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
SSU ribosomal protein S16P
Displaying 9 items

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