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L2_057_000M1_scaffold_612

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_612_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1034)
DNA (1032bp) protein (344aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CEW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25540.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L2_057_000M1_scaffold_612_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1038..2078)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CDX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25539.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ABC-type Fe3+-siderophore transport system, permease component
L2_057_000M1_scaffold_612_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2089..3303)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CDQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25538.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
L2_057_000M1_scaffold_612_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3304..7866)
DNA (4563bp) protein (1521aa)
Iron transport-associated domain protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CTE2_9FIRM
Iron transport-associated domain protein {ECO:0000313|EMBL:EDY31564.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L2_057_000M1_scaffold_612_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8302..9357)
DNA (1056bp) protein (352aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CTE3_9FIRM
L2_057_000M1_scaffold_612_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9425..10432)
DNA (1008bp) protein (336aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CTE4_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EDY31566.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
dehydrogenase
L2_057_000M1_scaffold_612_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10520..11935)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CDW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25534.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
MATE efflux family protein
L2_057_000M1_scaffold_612_8
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11967..13631)
DNA (1665bp) protein (555aa)
Purine catabolism regulatory protein-like family n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CTE6_9FIRM
Purine catabolism regulatory protein-like family {ECO:0000313|EMBL:EDY31568.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Regulator of polyketide synthase expression
L2_057_000M1_scaffold_612_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13831..15135)
DNA (1305bp) protein (435aa)
Chloride transporter, ClC family n=2 Tax=Ruminococcus lactaris RepID=B5CTE8_9FIRM
Chloride transporter, ClC family {ECO:0000313|EMBL:EDY31570.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Chloride channel protein EriC
L2_057_000M1_scaffold_612_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15339..16334)
DNA (996bp) protein (332aa)
Bile acid transporter n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CTE9_9FIRM
Bile acid transporter {ECO:0000313|EMBL:EDY31571.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Predicted Na+-dependent transporter
L2_057_000M1_scaffold_612_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16698..17777)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CEV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25530.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_057_000M1_scaffold_612_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17958..18419)
DNA (462bp) protein (154aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ruminococcus lactaris RepID=B5CTF1_9FIRM
FKBP-type peptidyl-prolyl cis-trans isomerases 2
L2_057_000M1_scaffold_612_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18440..19504)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CTF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25528.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
Displaying 13 items

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