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L2_057_000M1_scaffold_179

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Displaying items 1-30 of 70 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_179_1
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

3..677
DNA (675bp) protein (225aa)
CRISPR-associated helicase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GXT9_9FIRM
CRISPR-associated helicase {ECO:0000313|EMBL:CDB29305.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Metal dependent phosphohydrolase (fragment)
L2_057_000M1_scaffold_179_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

815..1465
DNA (651bp) protein (217aa)
CRISPR-associated protein Cas5d family n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J1T5_9FIRM
CRISPR-associated protein Cas5d family {ECO:0000313|EMBL:CCY42902.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
CRISPR-associated protein, Cas5d family
L2_057_000M1_scaffold_179_3
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

1459..3255
DNA (1797bp) protein (599aa)
CRISPR-associated protein Cas8c/Csd1 subtype I-C/DVULG n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ILC0_9FIRM
CRISPR-associated protein Cas8c/Csd1 subtype I-C/DVULG {ECO:0000313|EMBL:CCY42900.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L2_057_000M1_scaffold_179_4
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

3259..4251
DNA (993bp) protein (331aa)
CRISPR-associated protein Csd2 family n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J1T2_9FIRM
CRISPR-associated protein Csd2 family {ECO:0000313|EMBL:CCY42897.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
CRISPR-associated protein, Csd2 family
L2_057_000M1_scaffold_179_5
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

4238..4906
DNA (669bp) protein (223aa)
CRISPR-associated protein Cas4 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IRJ8_9FIRM
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:CCY42894.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
CRISPR-associated protein Cas4
L2_057_000M1_scaffold_179_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

4903..5922
DNA (1020bp) protein (340aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J1S6_9FIRM
hypothetical protein
L2_057_000M1_scaffold_179_7
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

5926..6216
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J1I4_9FIRM
hypothetical protein
L2_057_000M1_scaffold_179_8
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7373..8713)
DNA (1341bp) protein (447aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QA15_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDC29904.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
D-alanyl-D-alanine carboxypeptidase
L2_057_000M1_scaffold_179_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8859..9545
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H409_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97341.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_057_000M1_scaffold_179_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10028..12088)
DNA (2061bp) protein (687aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EFQ05717.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFQ05717.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZM90_9FIRM
L2_057_000M1_scaffold_179_11
unknown

Not on your lists

12145..12369
DNA (225bp) protein (75aa)

This feature has no annotations

L2_057_000M1_scaffold_179_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13238..15232
DNA (1995bp) protein (665aa)
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit (EC:5.99.1.3)
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit {ECO:0000313|EMBL:CBL00269.1}; EC=5.99.1.3 {ECO:0000313|EMBL:CBL00269.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1X0_9FIRM
L2_057_000M1_scaffold_179_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15274..17526
DNA (2253bp) protein (751aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
DNA gyrase/topoisomerase IV, A subunit n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H694_9FIRM
L2_057_000M1_scaffold_179_14
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17536..18021
DNA (486bp) protein (162aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QBE3_9FIRM
hypothetical protein
L2_057_000M1_scaffold_179_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18554..19975
DNA (1422bp) protein (474aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Glycine--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBJ4_9FIRM
L2_057_000M1_scaffold_179_16
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20180..21193)
DNA (1014bp) protein (338aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R818_9FIRM
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:CDC30597.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_057_000M1_scaffold_179_17
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21463..21972
DNA (510bp) protein (170aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QI80_9FIRM
ybaK/ebsC protein
L2_057_000M1_scaffold_179_18
unknown

Not on your lists

22229..22327
DNA (99bp) protein (33aa)

This feature has no annotations

L2_057_000M1_scaffold_179_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22404..22904
DNA (501bp) protein (167aa)
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2V4_9FIRM
L2_057_000M1_scaffold_179_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22941..24404
DNA (1464bp) protein (488aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZL65_9FIRM
L2_057_000M1_scaffold_179_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24419..25465
DNA (1047bp) protein (349aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2V6_9FIRM
L2_057_000M1_scaffold_179_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25459..26055
DNA (597bp) protein (199aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Phosphoribosylglycinamide formyltransferase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8D9_9FIRM
phosphoribosylglycinamide formyltransferase
L2_057_000M1_scaffold_179_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26101..26892
DNA (792bp) protein (264aa)
IMP cyclohydrolase-like protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZL62_9FIRM
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:EFQ06088.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Archaeal IMP cyclohydrolase
L2_057_000M1_scaffold_179_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26905..28086
DNA (1182bp) protein (394aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
AICARFT/IMPCHase bienzyme n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8D7_9FIRM
AICARFT/IMPCHase bienzyme {ECO:0000313|EMBL:EDP22481.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_057_000M1_scaffold_179_25
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28086..29420
DNA (1335bp) protein (445aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QZM8_9FIRM
L2_057_000M1_scaffold_179_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29451..33143
DNA (3693bp) protein (1231aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:EDP22479.1}; EC=6.3.5.3 {ECO:0000313|EMBL:EDP22479.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8D5_9FIRM
L2_057_000M1_scaffold_179_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33268..34713
DNA (1446bp) protein (482aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172, ECO:0000313|EMBL:CBL02735.1}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172, ECO:0000313|EMBL:CBL02735.1};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Adenylosuccinate lyase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K576_9FIRM
L2_057_000M1_scaffold_179_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35496..36197
DNA (702bp) protein (234aa)
ribosomal small subunit pseudouridine synthase A (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887, ECO:0000313|EMBL:CBL02736.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Pseudouridine synthase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K577_9FIRM
L2_057_000M1_scaffold_179_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36466..37551
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97009.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
transcriptional regulator, CdaR family
L2_057_000M1_scaffold_179_30
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37687..38376
DNA (690bp) protein (230aa)
Cell division ATP-binding protein FtsE n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q355_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CDC27464.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
cell division ATP-binding protein FtsE
Displaying items 1-30 of 70 in total

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