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L2_057_000M1_scaffold_212

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_212_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(394..729)
DNA (336bp) protein (112aa)
Acetyltransferase, GNAT family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FR22_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEG94884.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
GNAT family acetyltransferase
L2_057_000M1_scaffold_212_2
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(729..947)
DNA (219bp) protein (73aa)
Acetyltransferase, GNAT family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FR22_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEG94884.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Sortase and related acyltransferases
L2_057_000M1_scaffold_212_3
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1126..2319
DNA (1194bp) protein (398aa)
Predicted transcriptional regulators n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q1Y7_9FIRM
Predicted transcriptional regulators {ECO:0000313|EMBL:CDC30743.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Predicted transcriptional regulators
L2_057_000M1_scaffold_212_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2355..3305)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44049.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
LysR family transcriptional regulator
L2_057_000M1_scaffold_212_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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3478..4557
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44050.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
NAD/NADP octopine/nopaline dehydrogenase
L2_057_000M1_scaffold_212_6
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4600..5133
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BJX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI72525.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
flavin reductase domain protein FMN-binding protein
L2_057_000M1_scaffold_212_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5404..6129
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07851.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Uncharacterised protein family (UPF0153).
L2_057_000M1_scaffold_212_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6278..7291
DNA (1014bp) protein (338aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAT8_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEU94981.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC-type uncharacterized transport system, periplasmic component
L2_057_000M1_scaffold_212_9
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7410..8357
DNA (948bp) protein (316aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QIK7_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CDC30746.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ABC-type uncharacterized transport system, permease component
L2_057_000M1_scaffold_212_10
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8350..9144
DNA (795bp) protein (265aa)
ABC transporter ATP-binding protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R8G0_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC30747.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ABC-type uncharacterized transport system, ATPase component
L2_057_000M1_scaffold_212_11
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9221..10309)
DNA (1089bp) protein (363aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Sugar kinases ribokinase family n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q1Z2_9FIRM
Sugar kinases ribokinase family {ECO:0000313|EMBL:CDC30748.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_057_000M1_scaffold_212_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10479..11399)
DNA (921bp) protein (307aa)
Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins (EC:1.97.1.4)
Radical SAM domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMN0_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EFQ05557.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_057_000M1_scaffold_212_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11506..13512
DNA (2007bp) protein (669aa)
hypothetical protein (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854, ECO:0000313|EMBL:CBK99242.1};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Fructose-1,6-bisphosphatase class 3 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYZ3_9FIRM
L2_057_000M1_scaffold_212_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13762..15045
DNA (1284bp) protein (428aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
murA3; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3 (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMN2_9FIRM
L2_057_000M1_scaffold_212_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15130..15921
DNA (792bp) protein (264aa)
Metallo-beta-lactamase domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMN3_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFQ05560.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L2_057_000M1_scaffold_212_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16038..16268
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KBN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN40102.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_057_000M1_scaffold_212_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16337..18478
DNA (2142bp) protein (714aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SGT6_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDP20364.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Poly(3-hydroxybutyrate) depolymerase
L2_057_000M1_scaffold_212_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18604..19593)
DNA (990bp) protein (330aa)
DNA replication protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ61_9FIRM
DNA replication protein
DNA replication protein {ECO:0000313|EMBL:CBK99310.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_057_000M1_scaffold_212_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19622..20536)
DNA (915bp) protein (305aa)
DnaD and phage-associated domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ62_9FIRM
DnaD and phage-associated domain
DnaD and phage-associated domain {ECO:0000313|EMBL:CBK99311.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_057_000M1_scaffold_212_20
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20539..20901)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QIL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30756.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_057_000M1_scaffold_212_21
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21535..22077
DNA (543bp) protein (181aa)
Phage minor capsid protein 2 n=1 Tax=Clostridium sp. CAG:964 RepID=R6VAM0_9CLOT
Phage minor capsid protein 2 {ECO:0000313|EMBL:CDC79752.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
L2_057_000M1_scaffold_212_22
unknown

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22058..22270
DNA (213bp) protein (71aa)

This feature has no annotations

L2_057_000M1_scaffold_212_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22903..25179
DNA (2277bp) protein (759aa)
Aconitase domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SG81_9FIRM
Aconitase domain protein {ECO:0000313|EMBL:EDP20191.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
aconitase protein
L2_057_000M1_scaffold_212_24
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25198..26055
DNA (858bp) protein (286aa)
PHP domain protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R8H1_9FIRM
PHP domain protein {ECO:0000313|EMBL:CDC30757.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Predicted metal-dependent phosphoesterases (PHP family)
L2_057_000M1_scaffold_212_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26105..26368
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ64_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99313.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_057_000M1_scaffold_212_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26499..27731)
DNA (1233bp) protein (411aa)
6-phosphofructokinase (EC:2.7.1.11)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
6-phosphofructokinase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBN9_9FIRM
L2_057_000M1_scaffold_212_27
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27898..29121)
DNA (1224bp) protein (408aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
6-phosphofructokinase (EC:2.7.1.11)
Phosphofructokinase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PUI0_9FIRM
L2_057_000M1_scaffold_212_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29371..30462
DNA (1092bp) protein (364aa)
GDSL-like protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGS5_9FIRM
GDSL-like protein {ECO:0000313|EMBL:EFQ07518.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
GDSL-like Lipase/Acylhydrolase.
L2_057_000M1_scaffold_212_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30536..32359)
DNA (1824bp) protein (608aa)
GTP-binding protein TypA n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H838_9FIRM
GTP-binding protein TypA {ECO:0000313|EMBL:EEU95919.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
GTP-binding protein TypA/BipA
L2_057_000M1_scaffold_212_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32664..34274
DNA (1611bp) protein (537aa)
Metallo-beta-lactamase domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMQ9_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFQ05555.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
Displaying items 1-30 of 43 in total

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