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L2_057_000M1_scaffold_247

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_247_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1144
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VHU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90205.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
bgl3A; beta-glucosidase Bgl3A
L2_057_000M1_scaffold_247_2
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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1146..1583
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0S0W2_BUTPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL33437.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
L2_057_000M1_scaffold_247_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1675..3240
DNA (1566bp) protein (522aa)
Uncharacterized protein (Fragment) n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06765.1}; Flags: Fragment;; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Na+/melibiose symporter and related transporters
L2_057_000M1_scaffold_247_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3356..4564)
DNA (1209bp) protein (403aa)
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIA6_9FIRM
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:EFB77574.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Penicillin V acylase-like amidase
L2_057_000M1_scaffold_247_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4854..5741
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZI21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07176.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Protein of unknown function (DUF2899).
L2_057_000M1_scaffold_247_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5895..7586
DNA (1692bp) protein (564aa)
Oligoendopeptidase, M3 family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYA8_9FIRM
oligoendopeptidase, M3 family
Oligoendopeptidase, M3 family {ECO:0000313|EMBL:CBK99007.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_057_000M1_scaffold_247_7
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7678..8109)
DNA (432bp) protein (144aa)
Large conductance mechanosensitive channel protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PYV8_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|SAAS:SAAS00023935}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
large conductance mechanosensitive channel protein
L2_057_000M1_scaffold_247_8
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8290..9837)
DNA (1548bp) protein (516aa)
Alkaline phosphatase (EC:3.1.3.1)
Alkaline phosphatase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q9B6_9FIRM
Alkaline phosphatase {ECO:0000313|EMBL:CDC29614.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_057_000M1_scaffold_247_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10192..10425
DNA (234bp) protein (78aa)
Acyl carrier protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGP2_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
acyl carrier protein
L2_057_000M1_scaffold_247_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10437..11312
DNA (876bp) protein (292aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
acetyl-CoA carboxylase, carboxyl transferase, beta subunit (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SE21_9FIRM
L2_057_000M1_scaffold_247_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11309..12283
DNA (975bp) protein (325aa)
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAA0_9FIRM
L2_057_000M1_scaffold_247_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12265..13224
DNA (960bp) protein (320aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.180 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGN8_9FIRM
L2_057_000M1_scaffold_247_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13221..14156
DNA (936bp) protein (312aa)
Dioxygenases related to 2-nitropropane dioxygenase (EC:1.3.1.-)
Putative enoyl-[acyl-carrier-protein] reductase II n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGN6_9FIRM
Putative enoyl-[acyl-carrier-protein] reductase II {ECO:0000313|EMBL:EFQ07675.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_057_000M1_scaffold_247_14
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14150..15217
DNA (1068bp) protein (356aa)
Dioxygenases related to 2-nitropropane dioxygenase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QGQ9_9FIRM
Dioxygenases related to 2-nitropropane dioxygenase {ECO:0000313|EMBL:CDC30026.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Dioxygenases related to 2-nitropropane dioxygenase
L2_057_000M1_scaffold_247_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15214..16152
DNA (939bp) protein (313aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
[Acyl-carrier-protein] S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGN4_9FIRM
L2_057_000M1_scaffold_247_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16149..16901
DNA (753bp) protein (251aa)
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CBL01768.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CBL01768.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAA5_9FIRM
L2_057_000M1_scaffold_247_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16916..18154
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.179 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447, ECO:0000313|EMBL:CBL01769.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAA6_9FIRM
L2_057_000M1_scaffold_247_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18158..18628
DNA (471bp) protein (157aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGN1_9FIRM
beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ
L2_057_000M1_scaffold_247_19
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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18818..19132
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N1T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF06052.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
transcriptional regulator, PadR family
L2_057_000M1_scaffold_247_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19136..20302
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S7J8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22712.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Protein of unknown function (DUF1700).
L2_057_000M1_scaffold_247_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20349..21074)
DNA (726bp) protein (242aa)
Two-component system, OmpR family, KDP operon response regulator KdpE n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH21_9FIRM
Two-component system, OmpR family, KDP operon response regulator KdpE {ECO:0000313|EMBL:EGJ45660.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_057_000M1_scaffold_247_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21067..23043)
DNA (1977bp) protein (659aa)
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBK99359.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Osmosensitive K+ channel histidine kinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZB0_9FIRM
L2_057_000M1_scaffold_247_23
unknown

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comp(23207..23461)
DNA (255bp) protein (85aa)

This feature has no annotations

L2_057_000M1_scaffold_247_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23507..24154)
DNA (648bp) protein (216aa)
TrkA N-terminal domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJQ0_9FIRM
TrkA N-terminal domain protein {ECO:0000313|EMBL:EFQ06589.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
K+ transport systems, NAD-binding component
L2_057_000M1_scaffold_247_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24224..25558)
DNA (1335bp) protein (445aa)
Trk-type K+ transport systems, membrane components n=2 Tax=Faecalibacterium prausnitzii RepID=D4K5J7_9FIRM
Trk-type K+ transport systems, membrane components
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EDP20281.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_057_000M1_scaffold_247_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25745..26860)
DNA (1116bp) protein (372aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6Y3_9FIRM
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL00596.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_057_000M1_scaffold_247_27
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26993..27814
DNA (822bp) protein (274aa)
Transcriptional regulator AraC family n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R6D5_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDC29922.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_057_000M1_scaffold_247_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27859..29163)
DNA (1305bp) protein (435aa)
Na+-driven multidrug efflux pump n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0J1_9FIRM
Na+-driven multidrug efflux pump
Na+-driven multidrug efflux pump {ECO:0000313|EMBL:CBK99790.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_057_000M1_scaffold_247_29

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29291..30322
DNA (1032bp) protein (344aa)
Transcriptional regulator LacI family n=1 Tax=uncultured bacterium RepID=S6CQ19_9BACT
Transcriptional regulator LacI family {ECO:0000313|EMBL:CCG05876.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scrR; sucrose operon repressor
L2_057_000M1_scaffold_247_30

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30483..31868
DNA (1386bp) protein (462aa)
PTS system glucose subfamily IIA component n=2 Tax=root RepID=S6CP87_9BACT
PTS system glucose subfamily IIA component {ECO:0000313|EMBL:CCG05877.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PTS system, glucose subfamily, IIA component
Displaying items 1-30 of 42 in total

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