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L2_057_000M1_scaffold_406

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_406_1
unknown

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768..1319
DNA (552bp) protein (184aa)

This feature has no annotations

L2_057_000M1_scaffold_406_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1438..2709)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZH34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07627.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted permease
L2_057_000M1_scaffold_406_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2752..4098)
DNA (1347bp) protein (449aa)
Butyryl-CoA:acetate CoA-transferase {ECO:0000313|EMBL:EDP20029.1}; EC=2.8.3.- {ECO:0000313|EMBL:EDP20029.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Butyryl-CoA:acetate CoA-transferase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SFP6_9FIRM
Acetyl-CoA hydrolase
L2_057_000M1_scaffold_406_4
unknown

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comp(4098..4391)
DNA (294bp) protein (98aa)

This feature has no annotations

L2_057_000M1_scaffold_406_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4567..5073
DNA (507bp) protein (169aa)
pantetheine-phosphate adenylyltransferase, bacterial (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Phosphopantetheine adenylyltransferase n=2 Tax=Faecalibacterium prausnitzii RepID=D4K634_9FIRM
L2_057_000M1_scaffold_406_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5150..6367
DNA (1218bp) protein (406aa)
acetyl-CoA acetyltransferases (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=2 Tax=root RepID=A8SFP2_9FIRM
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:EDP20025.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_057_000M1_scaffold_406_7
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6462..7247
DNA (786bp) protein (262aa)
Enoyl-CoA hydratase/carnithine racemase (EC:4.2.1.55)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R5J0_9FIRM
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:CDC29527.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_057_000M1_scaffold_406_8
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7296..8168
DNA (873bp) protein (291aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157 1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q958_9FIRM
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:CDC29529.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_057_000M1_scaffold_406_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8278..9447
DNA (1170bp) protein (390aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase, C-terminal domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5L0_9FIRM
Acyl-CoA dehydrogenase, C-terminal domain protein {ECO:0000313|EMBL:EEU96803.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L2_057_000M1_scaffold_406_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9464..10258
DNA (795bp) protein (265aa)
Electron transfer flavoprotein, beta subunit n=2 Tax=Faecalibacterium prausnitzii RepID=D4K639_9FIRM
Electron transfer flavoprotein, beta subunit
Electron transfer flavoprotein domain protein {ECO:0000313|EMBL:EDP20021.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_057_000M1_scaffold_406_11
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10280..11374
DNA (1095bp) protein (365aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QFC4_9FIRM
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:CDC29556.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Electron transfer flavoprotein, alpha subunit
L2_057_000M1_scaffold_406_12
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11867..13504
DNA (1638bp) protein (546aa)
Cell division protein FtsI/penicillin-binding protein 2 (EC:2.4.1.129)
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q4Y4_9FIRM
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CDC28074.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_057_000M1_scaffold_406_13
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13650..13895
DNA (246bp) protein (82aa)
Preprotein translocase SecG subunit n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R1A8_9FIRM
Preprotein translocase SecG subunit {ECO:0000313|EMBL:CDC28072.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
protein translocase, SecG subunit
L2_057_000M1_scaffold_406_14
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14053..16170
DNA (2118bp) protein (706aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QBD5_9FIRM
L2_057_000M1_scaffold_406_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16211..16693
DNA (483bp) protein (161aa)
Acetyltransferases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3P7_9FIRM
Acetyltransferases
Acetyltransferases {ECO:0000313|EMBL:CBK98140.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_057_000M1_scaffold_406_16
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(16760..17107)
DNA (348bp) protein (116aa)
Protein from nitrogen regulatory protein P-II (GLNB) n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HCP6_9FIRM
Protein from nitrogen regulatory protein P-II (GLNB) {ECO:0000313|EMBL:CCY27475.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L2_057_000M1_scaffold_406_17
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17351..17971)
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Coprococcus catus GD/7 RepID=D4JBN1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK81752.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_057_000M1_scaffold_406_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18302..20059
DNA (1758bp) protein (586aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5E3_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEU96831.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterases-like protein
L2_057_000M1_scaffold_406_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20498..20788
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SG74_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02932.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_057_000M1_scaffold_406_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20928..21074
DNA (147bp) protein (49aa)
RSAM-modified six-cysteine peptide n=4 Tax=Faecalibacterium RepID=A8SG73_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02933.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_057_000M1_scaffold_406_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21156..22610
DNA (1455bp) protein (485aa)
Arylsulfatase regulator (Fe-S oxidoreductase) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3I4_9FIRM
Arylsulfatase regulator (Fe-S oxidoreductase)
Arylsulfatase regulator (Fe-S oxidoreductase) {ECO:0000313|EMBL:CBK98077.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_057_000M1_scaffold_406_22
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22607..24022
DNA (1416bp) protein (472aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Orn/Lys/Arg decarboxylase major domain protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q8V2_9FIRM
Orn/Lys/Arg decarboxylase major domain protein {ECO:0000313|EMBL:CDC29444.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_057_000M1_scaffold_406_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24272..25489
DNA (1218bp) protein (406aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEU96839.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEU96839.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
mgs; 1,2-diacylglycerol 3-glucosyltransferase (EC:2.4.1.157)
Glycosyltransferase, group 1 family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5F1_9FIRM
L2_057_000M1_scaffold_406_24
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25534..26529)
DNA (996bp) protein (332aa)
Pseudouridylate synthases, 23S RNA-specific (EC:5.4.99.12)
Pseudouridylate synthases 23S RNA-specific n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q0X1_9FIRM
Pseudouridylate synthases 23S RNA-specific {ECO:0000313|EMBL:CDC29425.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_057_000M1_scaffold_406_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27067..29112
DNA (2046bp) protein (682aa)
UvrABC system protein B n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3R4_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Excinuclease ABC subunit B
L2_057_000M1_scaffold_406_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29099..30322
DNA (1224bp) protein (408aa)
UvrABC system protein A n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S887_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
uvrA; UvrABC system protein A
Displaying 26 items

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