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L2_057_000M1_scaffold_546

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_546_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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166..879
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SEN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP19716.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L2_057_000M1_scaffold_546_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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884..1375
DNA (492bp) protein (164aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KB45_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBL02058.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_057_000M1_scaffold_546_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1441..2424)
DNA (984bp) protein (328aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZK11_9FIRM
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EFQ06494.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L2_057_000M1_scaffold_546_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2530..4134)
DNA (1605bp) protein (535aa)
Peptide chain release factor 3 n=2 Tax=Faecalibacterium prausnitzii RepID=D4K936_9FIRM
bacterial peptide chain release factor 3 (bRF-3)
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_057_000M1_scaffold_546_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4366..5235)
DNA (870bp) protein (290aa)
Acetyltransferase, GNAT family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9H9_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDP22251.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
L2_057_000M1_scaffold_546_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5506..6849
DNA (1344bp) protein (448aa)
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain (EC:1.3.1.74 3.4.21.-)
Trypsin n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9I0_9FIRM
Trypsin {ECO:0000313|EMBL:EDP22252.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_057_000M1_scaffold_546_7
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6921..8225)
DNA (1305bp) protein (435aa)
Peptidase M23 family n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q9I4_9FIRM
Peptidase M23 family {ECO:0000313|EMBL:CDC29704.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Membrane-bound metallopeptidase
L2_057_000M1_scaffold_546_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8291..8626)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZK14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06497.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_057_000M1_scaffold_546_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8751..9818)
DNA (1068bp) protein (356aa)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EDP19710.1}; EC=3.2.2.- {ECO:0000313|EMBL:EDP19710.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
A/G-specific adenine glycosylase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SEM7_9FIRM
MutY; A/G-specific DNA glycosylase
L2_057_000M1_scaffold_546_10
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9802..11007)
DNA (1206bp) protein (402aa)
aminotransferase, class I/II (EC:4.4.1.8)
Aminotransferase class I/II n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q9D4_9FIRM
Aminotransferase class I/II {ECO:0000313|EMBL:CDC29644.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_057_000M1_scaffold_546_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11187..11732)
DNA (546bp) protein (182aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJY5_9FIRM
L2_057_000M1_scaffold_546_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11867..12661)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXG6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98715.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_057_000M1_scaffold_546_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12640..13998)
DNA (1359bp) protein (453aa)
Predicted DNA-binding protein with the Helix-hairpin-helix motif n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9A8_9FIRM
Predicted DNA-binding protein with the Helix-hairpin-helix motif
Predicted DNA-binding protein with the Helix-hairpin-helix motif {ECO:0000313|EMBL:CBL01421.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_057_000M1_scaffold_546_14
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14020..14652)
DNA (633bp) protein (211aa)
SOS-response transcriptional repressors (RecA-mediated autopeptidases) n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q1K8_9FIRM
SOS-response transcriptional repressors (RecA-mediated autopeptidases) {ECO:0000313|EMBL:CDC29640.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
SOS-response transcriptional repressors (RecA-mediated autopeptidases)
L2_057_000M1_scaffold_546_15
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15262..16287)
DNA (1026bp) protein (342aa)
Dihydrodipicolinate reductase domain protein n=2 Tax=Clostridium RepID=A7VSZ0_9CLOT
Dihydrodipicolinate reductase domain protein {ECO:0000313|EMBL:CDC04648.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
dihydrodipicolinate reductase
L2_057_000M1_scaffold_546_16
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16428..17270)
DNA (843bp) protein (281aa)
Transcriptional regulator, MerR family n=2 Tax=Clostridium RepID=A7VSZ1_9CLOT
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EDO61287.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
MerR family transcriptional regulator
L2_057_000M1_scaffold_546_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17354..18064)
DNA (711bp) protein (237aa)
TraX protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K231_9FIRM
TraX protein.
TraX protein {ECO:0000313|EMBL:CBL00330.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_057_000M1_scaffold_546_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18391..19281
DNA (891bp) protein (297aa)
LysR substrate binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8I4_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EEU95689.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Transcriptional regulator
L2_057_000M1_scaffold_546_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19343..20917
DNA (1575bp) protein (525aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJX7_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFQ06519.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Lipase (class 3).
Displaying 19 items

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