ggKbase home page

L2_057_000M1_scaffold_648

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_648_1
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(316..852)
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=root RepID=R6QAM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30084.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_057_000M1_scaffold_648_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(852..2735)
DNA (1884bp) protein (628aa)
Predicted glycosyltransferases n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9S5_9FIRM
Predicted glycosyltransferases {ECO:0000313|EMBL:CBL01588.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Predicted glycosyltransferases
L2_057_000M1_scaffold_648_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2750..3493)
DNA (744bp) protein (248aa)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9H8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU95430.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L2_057_000M1_scaffold_648_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3505..4296)
DNA (792bp) protein (264aa)
PyrBI operon leader peptide n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9H7_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L2_057_000M1_scaffold_648_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4320..4886)
DNA (567bp) protein (189aa)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EFQ06300.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EFQ06300.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZKH1_9FIRM
L2_057_000M1_scaffold_648_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4960..6264)
DNA (1305bp) protein (435aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBL01584.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CBL01584.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9S1_9FIRM
L2_057_000M1_scaffold_648_7
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6457..7245
DNA (789bp) protein (263aa)
Putative dipicolinic acid synthetase A subunit n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q2T2_9FIRM
Putative dipicolinic acid synthetase A subunit {ECO:0000313|EMBL:CDC30065.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
L2_057_000M1_scaffold_648_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7238..7837
DNA (600bp) protein (200aa)
Dipicolinate synthase subunit B n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9H4_9FIRM
Dipicolinate synthase subunit B {ECO:0000313|EMBL:EEU95426.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Phosphopantothenoylcysteine synthetase/decarboxylase
L2_057_000M1_scaffold_648_9
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8273..8875)
DNA (603bp) protein (201aa)
Predicted membrane protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R6N1_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDC30062.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Predicted membrane protein
L2_057_000M1_scaffold_648_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9027..10010)
DNA (984bp) protein (328aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4J1_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EEU97173.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted dehydrogenases and related proteins
L2_057_000M1_scaffold_648_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10007..10828)
DNA (822bp) protein (274aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
pantothenate kinase, type III (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4J2_9FIRM
L2_057_000M1_scaffold_648_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11100..12296
DNA (1197bp) protein (399aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic {ECO:0000313|EMBL:CBK99897.1}; EC=6.3.2.5 {ECO:0000313|EMBL:CBK99897.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0U8_9FIRM
L2_057_000M1_scaffold_648_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12377..13846)
DNA (1470bp) protein (490aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZKG0_9FIRM
L2_057_000M1_scaffold_648_14
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14224..15069
DNA (846bp) protein (282aa)
EDD domain protein DegV family n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q6N5_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CDC28649.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
EDD domain protein, DegV family
L2_057_000M1_scaffold_648_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15251..16633)
DNA (1383bp) protein (461aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Histidine kinase A domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9H1_9FIRM
His Kinase A (phosphoacceptor) domain.
L2_057_000M1_scaffold_648_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16615..17295)
DNA (681bp) protein (227aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9H0_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU95422.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
response regulator
L2_057_000M1_scaffold_648_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17311..18171)
DNA (861bp) protein (287aa)
Protein TraX n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Y9_9FIRM
Protein TraX {ECO:0000313|EMBL:EDP22145.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
TraX protein.
Displaying 17 items

View Taxonomy