ggKbase home page

L2_057_045G1_scaffold_252

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_045G1_scaffold_252_1
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(239..889)
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Veillonella sp. ACP1 RepID=J5ANG6_9FIRM
ribulose-phosphate 3-epimerase
L2_057_045G1_scaffold_252_2
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(891..1754)
DNA (864bp) protein (288aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L8Q5_9FIRM
ribosome small subunit-dependent GTPase A
L2_057_045G1_scaffold_252_3
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1762..3687)
DNA (1926bp) protein (642aa)
Kinase domain protein n=1 Tax=Veillonella atypica KON RepID=L1PYW6_9FIRM
Kinase domain protein {ECO:0000313|EMBL:EKY20888.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
serine/threonine protein kinase with PASTA sensor(s)
L2_057_045G1_scaffold_252_4
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3714..4415)
DNA (702bp) protein (234aa)
Protein phosphatase 2C n=3 Tax=Veillonella RepID=E1L8Q7_9FIRM
Phosphoprotein phosphatase {ECO:0000313|EMBL:EUB26607.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
protein serine/threonine phosphatase
L2_057_045G1_scaffold_252_5
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4408..5454)
DNA (1047bp) protein (349aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Veillonella sp. ACP1 RepID=J4QE07_9FIRM
radical SAM enzyme, Cfr family
L2_057_045G1_scaffold_252_6
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5485..6843)
DNA (1359bp) protein (453aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Veillonella sp. ACP1 RepID=J4RQ07_9FIRM
sun protein
L2_057_045G1_scaffold_252_7
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6827..7525)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Veillonella sp. HPA0037 RepID=S3AUX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY20884.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
hypothetical protein
L2_057_045G1_scaffold_252_8
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7608..8582)
DNA (975bp) protein (325aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Methionyl-tRNA formyltransferase n=1 Tax=Veillonella sp. ACP1 RepID=J4QD94_9FIRM
methionyl-tRNA formyltransferase
L2_057_045G1_scaffold_252_9
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8608..9096)
DNA (489bp) protein (163aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
Peptide deformylase n=3 Tax=Veillonella RepID=E1L8R2_9FIRM
peptide deformylase
L2_057_045G1_scaffold_252_10
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9109..11292)
DNA (2184bp) protein (728aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
Primosomal protein N n=1 Tax=Veillonella sp. HPA0037 RepID=S2ZUK4_9FIRM
primosomal protein N'
L2_057_045G1_scaffold_252_11
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11381..12571)
DNA (1191bp) protein (397aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
S-adenosylmethionine synthase n=4 Tax=Veillonella RepID=E1L8R4_9FIRM
S-adenosylmethionine synthetase
L2_057_045G1_scaffold_252_12
unknown

Not on your lists

12807..13046
DNA (240bp) protein (80aa)

This feature has no annotations

L2_057_045G1_scaffold_252_13
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12938..14140)
DNA (1203bp) protein (401aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EUB26674.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EUB26674.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EUB26674.1};; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Veillonella atypica KON RepID=L1PYR0_9FIRM
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
L2_057_045G1_scaffold_252_14
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14195..14410)
DNA (216bp) protein (72aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
DNA-directed RNA polymerase subunit omega n=5 Tax=Veillonella RepID=E1L8R6_9FIRM
DNA-directed RNA polymerase subunit omega
L2_057_045G1_scaffold_252_15
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14415..15044)
DNA (630bp) protein (210aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
Guanylate kinase n=4 Tax=Veillonella RepID=E1L8R7_9FIRM
guanylate kinase
L2_057_045G1_scaffold_252_16
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15053..15322)
DNA (270bp) protein (90aa)
UPF0296 protein HMPREF9321_0143 n=5 Tax=Veillonella RepID=E1L8R8_9FIRM
UPF0296 protein HMPREF0870_00290 {ECO:0000256|HAMAP-Rule:MF_01503}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
hypothetical protein
L2_057_045G1_scaffold_252_17
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15335..16216)
DNA (882bp) protein (294aa)
TIGR00255 family protein n=1 Tax=Veillonella sp. ACP1 RepID=J4JG41_9FIRM
TIGR00255 family protein {ECO:0000313|EMBL:EUB26567.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
hypothetical protein
L2_057_045G1_scaffold_252_18
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16324..17133
DNA (810bp) protein (270aa)
Fibronectin-binding protein A domain protein (Fragment) n=1 Tax=Veillonella atypica ACS-134-V-Col7a RepID=E1L9K2_9FIRM
Fibronectin-binding protein A, N-terminal domain protein {ECO:0000313|EMBL:EUB26554.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
fibronectin-binding A domain-containing protein
Displaying 18 items

View Taxonomy