ggKbase home page

L2_057_045G1_scaffold_298

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_045G1_scaffold_298_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1..846
DNA (846bp) protein (282aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Release factor glutamine methyltransferase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KZ34_9FIRM
HemK family modification methylase
L2_057_045G1_scaffold_298_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

848..1879
DNA (1032bp) protein (344aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KZ33_9FIRM
Sua5/YciO/YrdC/YwlC family protein
L2_057_045G1_scaffold_298_3
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1992..2438
DNA (447bp) protein (149aa)
Putative low molecular weight protein-tyrosine-phosphatase Ptp n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KZ32_9FIRM
Putative low molecular weight protein-tyrosine-phosphatase Ptp {ECO:0000313|EMBL:EGL77811.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
protein tyrosine phosphatase
L2_057_045G1_scaffold_298_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2450..2887
DNA (438bp) protein (146aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EGL77703.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EGL77703.1};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Ribose-5-phosphate isomerase B n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KZ31_9FIRM
RpiB/LacA/LacB family sugar-phosphate isomerase
L2_057_045G1_scaffold_298_5
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2934..4166
DNA (1233bp) protein (411aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
Serine hydroxymethyltransferase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KZ30_9FIRM
glycine hydroxymethyltransferase
L2_057_045G1_scaffold_298_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4351..4977
DNA (627bp) protein (209aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Uracil phosphoribosyltransferase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KZ29_9FIRM
uracil phosphoribosyltransferase
L2_057_045G1_scaffold_298_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5217..6242
DNA (1026bp) protein (342aa)
Sugar-binding domain protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KZ28_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EGL77988.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
DeoR family transcriptional regulator
L2_057_045G1_scaffold_298_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6354..7211
DNA (858bp) protein (286aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KZ27_9FIRM
glyceraldehyde-3-phosphate dehydrogenase
L2_057_045G1_scaffold_298_9
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7225..8403
DNA (1179bp) protein (393aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
UPI0003D59911 related cluster n=1 Tax=unknown RepID=UPI0003D59911
phosphoglycerate kinase
L2_057_045G1_scaffold_298_10
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8405..9175
DNA (771bp) protein (257aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
UPI000300F612 related cluster n=1 Tax=unknown RepID=UPI000300F612
triosephosphate isomerase
L2_057_045G1_scaffold_298_11
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9189..10715
DNA (1527bp) protein (509aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KI80_9FIRM
phosphoglycerate mutase
L2_057_045G1_scaffold_298_12
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10833..12116
DNA (1284bp) protein (428aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
Enolase n=2 Tax=Veillonella sp. 6_1_27 RepID=D6KND4_9FIRM
enolase
L2_057_045G1_scaffold_298_13
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12305..13315
DNA (1011bp) protein (337aa)
General secretory pathway protein E n=2 Tax=Veillonella RepID=D6KI78_9FIRM
General secretory pathway protein E {ECO:0000313|EMBL:EFG23825.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
type II secretion system protein E
L2_057_045G1_scaffold_298_14
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13299..14318
DNA (1020bp) protein (340aa)
Twitching motility protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KND2_9FIRM
Type II secretion system protein E {ECO:0000313|EMBL:ETI97339.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
type II secretion system protein E
L2_057_045G1_scaffold_298_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14327..15502
DNA (1176bp) protein (392aa)
Type II secretory pathway, component PulF n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T3U9_9FIRM
Type II secretory pathway, component PulF {ECO:0000313|EMBL:EQC65772.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
type II secretion system protein
L2_057_045G1_scaffold_298_16
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15539..15874
DNA (336bp) protein (112aa)
UPI0003D5D8C9 related cluster n=1 Tax=unknown RepID=UPI0003D5D8C9
Putative general secretion pathway protein G {ECO:0000313|EMBL:EGL77920.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
type II secretory pathway pseudopilin PulG-like protein
L2_057_045G1_scaffold_298_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15906..16976)
DNA (1071bp) protein (357aa)
Site-specific recombinase, phage integrase family n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YMA1_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFB86748.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
phage integrase site specific recombinase
L2_057_045G1_scaffold_298_18
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16985..17242)
DNA (258bp) protein (86aa)
Putative toxin-antitoxin system, toxin component n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KLC9_9FIRM
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:EFG22722.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
L2_057_045G1_scaffold_298_19
unknown

Not on your lists

comp(17310..17777)
DNA (468bp) protein (156aa)

This feature has no annotations

L2_057_045G1_scaffold_298_20
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17779..18144)
DNA (366bp) protein (122aa)
DNA-binding helix-turn-helix protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UMX6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERT60254.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
helix-turn-helix domain-containing protein
L2_057_045G1_scaffold_298_21
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18297..18503
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BKN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX56125.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
XRE family transcriptional regulator
L2_057_045G1_scaffold_298_22
unknown

Not on your lists

18534..18833
DNA (300bp) protein (100aa)

This feature has no annotations

L2_057_045G1_scaffold_298_23
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18826..19029
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FP72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEP65892.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
L2_057_045G1_scaffold_298_24
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19103..19699
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Dialister invisus CAG:218 RepID=R5SJA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ53895.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
protein of unknown function DUF1351
Displaying 24 items

View Taxonomy