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L2_057_045G1_scaffold_386

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_045G1_scaffold_386_1
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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241..960
DNA (720bp) protein (240aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LDX0_9FIRM
orotidine 5'-phosphate decarboxylase
L2_057_045G1_scaffold_386_2
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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957..1544
DNA (588bp) protein (196aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
Orotate phosphoribosyltransferase n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LDX1_9FIRM
orotate phosphoribosyltransferase
L2_057_045G1_scaffold_386_3
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1745..2131)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LDX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFR59768.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
hypothetical protein
L2_057_045G1_scaffold_386_4
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2141..2716)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LDX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFR59850.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
hypothetical protein
L2_057_045G1_scaffold_386_5
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2703..3032)
DNA (330bp) protein (110aa)
Transcriptional regulator, PadR family n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LDX4_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EFR59969.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
PadR family transcriptional regulator
L2_057_045G1_scaffold_386_6
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3206..3682)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LDX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFR60102.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
L2_057_045G1_scaffold_386_7
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3727..4281)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LDX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFR59773.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
hypothetical protein
L2_057_045G1_scaffold_386_8

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comp(4274..4702)
DNA (429bp) protein (143aa)
UPI0003D5FEA9 related cluster n=1 Tax=unknown RepID=UPI0003D5FEA9
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ETJ44513.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
PadR family transcriptional regulator
L2_057_045G1_scaffold_386_9
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4936..6033)
DNA (1098bp) protein (366aa)
Trypsin n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LDX8_9FIRM
Trypsin {ECO:0000313|EMBL:EFR60064.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
peptidase S1 and S6 chymotrypsin/Hap
L2_057_045G1_scaffold_386_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6467..7156)
DNA (690bp) protein (230aa)
Two component transcriptional regulator, winged helix family n=5 Tax=Veillonella RepID=D1BL25_VEIPT
transcriptional regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:EFB86238.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
L2_057_045G1_scaffold_386_11
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(7153..8493)
DNA (1341bp) protein (447aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FSQ2_9FIRM
histidine kinase
L2_057_045G1_scaffold_386_12
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8898..9263)
DNA (366bp) protein (122aa)
Conserved carboxylase domain protein {ECO:0000313|EMBL:EFR60100.1}; EC=6.4.1.1 {ECO:0000313|EMBL:EFR60100.1};; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
Conserved carboxylase domain protein n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LDY1_9FIRM
carboxylase
Displaying 12 items

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