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L2_057_045G1_scaffold_82

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_045G1_scaffold_82_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..443
DNA (441bp) protein (147aa)
Transposase n=2 Tax=Bifidobacterium longum RepID=B3DPE8_BIFLD
transposase
Uncharacterized protein {ECO:0000313|EMBL:CBK70207.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_057_045G1_scaffold_82_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

586..1065
DNA (480bp) protein (160aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Propionibacterium sp. oral taxon 192 str. F0372 RepID=S3Y542_9ACTO
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:KFI70154.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
excisionase family DNA binding domain-containing protein
L2_057_045G1_scaffold_82_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1135..2220)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GF71_PROFC
Uncharacterized protein {ECO:0000313|EMBL:KFI70155.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_057_045G1_scaffold_82_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2361..2537)
DNA (177bp) protein (59aa)
transporter n=1 Tax=Bifidobacterium breve RepID=UPI0002DC92B3
Permease
Transporter, auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:AEF26633.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_057_045G1_scaffold_82_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2534..3409)
DNA (876bp) protein (292aa)
IclR helix-turn-helix domain protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I3L6_BIFLN
IclR helix-turn-helix domain protein {ECO:0000313|EMBL:CCK35790.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
transcriptional regulator
L2_057_045G1_scaffold_82_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3662..5215
DNA (1554bp) protein (518aa)
Histidine ammonia-lyase {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026}; EC=4.3.1.3 {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026};; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Histidine ammonia-lyase n=10 Tax=Bifidobacterium longum RepID=D6DCG5_BIFLN
histidine ammonia-lyase
L2_057_045G1_scaffold_82_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5429..8098
DNA (2670bp) protein (890aa)
Clp protease n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ARL9_BIFLN
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Clp protease
L2_057_045G1_scaffold_82_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8246..9355
DNA (1110bp) protein (370aa)
Putative glutamyl-queuosine tRNA(Asp) synthetase n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BD77_BIFLN
Glutamyl-Q tRNA(Asp) ligase {ECO:0000313|EMBL:KHD95825.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
gltX2; gltx2
L2_057_045G1_scaffold_82_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9381..10490
DNA (1110bp) protein (370aa)
Glycerophosphoryl diester phosphodiesterase n=9 Tax=Bifidobacterium longum RepID=D6ZWM8_BIFLJ
glycerophosphoryl diester phosphodiesterase
Putative phosphodiesterase {ECO:0000313|EMBL:BAJ67443.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_057_045G1_scaffold_82_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10686..11165)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Ribosomal RNA large subunit methyltransferase H n=4 Tax=Bifidobacterium breve RepID=F6C8E4_BIFBA
Hypothetical protein
L2_057_045G1_scaffold_82_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11213..11854)
DNA (642bp) protein (214aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Uracil phosphoribosyltransferase n=7 Tax=Bifidobacterium RepID=UPP_BIFLD
upp; uracil phosphoribosyltransferase
L2_057_045G1_scaffold_82_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12158..13468
DNA (1311bp) protein (437aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=S3DI36_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ67440.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_057_045G1_scaffold_82_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13728..14402)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=C2GWL1_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEQ56048.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L2_057_045G1_scaffold_82_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14539..15738)
DNA (1200bp) protein (400aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ARM9_BIFLN
NTP pyrophosphohydrolase {ECO:0000313|EMBL:KHD95830.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hypothetical protein
L2_057_045G1_scaffold_82_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15896..18133)
DNA (2238bp) protein (746aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=11 Tax=Bifidobacterium RepID=D6DCF6_BIFLN
L2_057_045G1_scaffold_82_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18638..20011
DNA (1374bp) protein (458aa)
Calcineurin-like phosphoesterase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DCF5_BIFLN
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:BAP84376.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
Calcineurin-like phosphoesterase.
L2_057_045G1_scaffold_82_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20247..21047)
DNA (801bp) protein (267aa)
Transcriptional regulator, IclR family n=6 Tax=Bifidobacterium RepID=D6DCF4_BIFLN
transcriptional regulator
IclR helix-turn-helix domain protein {ECO:0000313|EMBL:CCK35776.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L2_057_045G1_scaffold_82_18
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21341..22744
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
3-isopropylmalate dehydratase large subunit n=3 Tax=Bifidobacterium RepID=I3AWB6_BIFLN
isopropylmalate isomerase large subunit
L2_057_045G1_scaffold_82_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22828..23520
DNA (693bp) protein (231aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
3-isopropylmalate dehydratase small subunit n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AWB7_BIFLN
isopropylmalate isomerase small subunit
L2_057_045G1_scaffold_82_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23743..23928)
DNA (186bp) protein (62aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44917.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_057_045G1_scaffold_82_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23969..24709
DNA (741bp) protein (247aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G4W0_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25065.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_057_045G1_scaffold_82_22
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24745..25518
DNA (774bp) protein (258aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G4W0_BIFLO
CAAX amino terminal protease
CAAX amino terminal protease {ECO:0000313|EMBL:EFV37001.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_057_045G1_scaffold_82_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25558..26685
DNA (1128bp) protein (376aa)
Dihydroorotate oxidase {ECO:0000313|EMBL:EIJ29295.1}; EC=1.3.98.1 {ECO:0000313|EMBL:EIJ29295.1};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Dihydroorotate oxidase n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BD52_BIFLN
pyrD3; pyrd3
L2_057_045G1_scaffold_82_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26890..28236)
DNA (1347bp) protein (449aa)
NADH oxidase {ECO:0000313|EMBL:EIJ29319.1}; EC=1.6.99.3 {ECO:0000313|EMBL:EIJ29319.1};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Uncharacterized NAD(FAD)-dependent dehydrogenases n=15 Tax=Bifidobacterium RepID=D6DCE8_BIFLN
hcaD; hcad
L2_057_045G1_scaffold_82_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28486..29811
DNA (1326bp) protein (442aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|SAAS:SAAS00085344};; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
UDP-N-acetylglucosamine enolpyruvyl transferase n=14 Tax=Bifidobacterium RepID=B3DPI6_BIFLD
murA; mura
L2_057_045G1_scaffold_82_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29860..31113)
DNA (1254bp) protein (418aa)
Aminotransferase, class I and II n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNM2_BIFLS
Aspartate aminotransferase {ECO:0000313|EMBL:KEY30731.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
putative aminotransferase
L2_057_045G1_scaffold_82_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31207..32139)
DNA (933bp) protein (311aa)
LysR substrate-binding domain protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BD94_BIFLN
LysR substrate-binding domain protein {ECO:0000313|EMBL:EIJ29337.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
transcriptional regulator
L2_057_045G1_scaffold_82_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32216..33196)
DNA (981bp) protein (327aa)
Putative permease n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R2J5_BIFLM
permease
Permease {ECO:0000313|EMBL:AEI96673.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_057_045G1_scaffold_82_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33142..33687)
DNA (546bp) protein (182aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium longum E18 RepID=V6XZ08_BIFLN
Putative transcriptional regulator {ECO:0000313|EMBL:BAP84364.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
transcriptional regulator
L2_057_045G1_scaffold_82_30
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


33901..35763
DNA (1863bp) protein (621aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Arginine--tRNA ligase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XZG2_9BIFI
argS; arginyl-tRNA synthetase
Displaying items 1-30 of 56 in total

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