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L2_057_045G1_scaffold_105

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_045G1_scaffold_105_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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44..472
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APH5_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI98505.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_057_045G1_scaffold_105_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(474..1466)
DNA (993bp) protein (331aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
Ribonucleoside-diphosphate reductase subunit beta n=12 Tax=Bifidobacterium RepID=D6DB25_BIFLN
ribonucleotide-diphosphate reductase subunit beta
L2_057_045G1_scaffold_105_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1481..1570)
DNA (90bp) protein (30aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=R5MV00_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44418.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_057_045G1_scaffold_105_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1691..3886)
DNA (2196bp) protein (732aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
Ribonucleoside-diphosphate reductase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APH3_BIFLN
ribonucleotide-diphosphate reductase subunit alpha
L2_057_045G1_scaffold_105_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3898..4356)
DNA (459bp) protein (153aa)
Protein NrdI n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APH2_BIFLN
ribonucleotide reductase stimulatory protein
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_057_045G1_scaffold_105_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4353..4619)
DNA (267bp) protein (89aa)
Ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit {ECO:0000313|EMBL:CBK71375.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CBK71375.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Glutaredoxin-like protein NrdH n=19 Tax=Bifidobacterium RepID=Q8G6H3_BIFLO
glutaredoxin
L2_057_045G1_scaffold_105_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5028..5585)
DNA (558bp) protein (186aa)
PTS system cellobiose-specific IIC component n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APH0_BIFLN
PTS system cellobiose-specific transporter subunit IIC
PTS system cellobiose-specific IIC component {ECO:0000313|EMBL:AEI98500.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_057_045G1_scaffold_105_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5578..8016)
DNA (2439bp) protein (813aa)
Glycosyl hydrolase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APG9_BIFLN
Glycosyl hydrolase {ECO:0000313|EMBL:AEI98499.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
glycosyl hydrolase
L2_057_045G1_scaffold_105_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8352..11309)
DNA (2958bp) protein (986aa)
Glycosyl hydrolase family 3 protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CPR0_BIFBR
Beta-glucosidase {ECO:0000313|EMBL:AHJ22078.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Beta-glucosidase
L2_057_045G1_scaffold_105_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11688..13775
DNA (2088bp) protein (696aa)
Kinase domain protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9B3_BIFLI
Kinase domain protein {ECO:0000313|EMBL:EEQ54737.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
RIO1 family protein
L2_057_045G1_scaffold_105_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13912..14889
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AR68_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ32374.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
dsbG; dsbg
L2_057_045G1_scaffold_105_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15413..16846
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DP39_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98898.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_057_045G1_scaffold_105_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


16879..17802
DNA (924bp) protein (308aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Ribosomal RNA small subunit methyltransferase A n=11 Tax=Bifidobacterium RepID=RSMA_BIFLS
dimethyladenosine transferase
L2_057_045G1_scaffold_105_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17799..18749
DNA (951bp) protein (317aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R1P8_BIFLM
ispE; ispe
L2_057_045G1_scaffold_105_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18796..19425
DNA (630bp) protein (210aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DP36_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98895.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_057_045G1_scaffold_105_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19510..20925)
DNA (1416bp) protein (472aa)
Putative RNA nucleotidyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWG7_BIFL1
RNA nucleotidyltransferase
RNA nucleotidyltransferase {ECO:0000313|EMBL:KEY33268.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_057_045G1_scaffold_105_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21012..22292
DNA (1281bp) protein (427aa)
NUDIX hydrolase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPE7_BIFLS
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACJ53542.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_057_045G1_scaffold_105_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22364..24532
DNA (2169bp) protein (723aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=Q8G6I8_BIFLO
Uncharacterized protein {ECO:0000313|EMBL:AAN24474.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
hypothetical protein
L2_057_045G1_scaffold_105_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24529..28356
DNA (3828bp) protein (1276aa)
Uncharacterized membrane protein, putative virulence factor n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DB08_BIFLN
Uncharacterized membrane protein, putative virulence factor {ECO:0000313|EMBL:CBK71361.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Uncharacterized membrane protein, putative virulence factor
L2_057_045G1_scaffold_105_20
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28476..29495
DNA (1020bp) protein (340aa)
TrxB2 n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MXF5_9BIFI
TrxB2 {ECO:0000313|EMBL:CCY96123.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
thioredoxin reductase
L2_057_045G1_scaffold_105_21
unknown

Not on your lists

29641..29946
DNA (306bp) protein (102aa)

This feature has no annotations

L2_057_045G1_scaffold_105_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29872..31233)
DNA (1362bp) protein (454aa)
Chromosome partitioning protein ParB n=10 Tax=Bifidobacterium RepID=F8APE1_BIFLN
chromosome partitioning protein ParB
ParB-like protein {ECO:0000313|EMBL:EEQ54715.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_057_045G1_scaffold_105_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31233..32204)
DNA (972bp) protein (324aa)
ATPase for chromosome partitioning n=9 Tax=Bifidobacterium longum RepID=B3DP28_BIFLD
soj4; soj4
ATPase for chromosome partitioning {ECO:0000313|EMBL:ACD98887.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_057_045G1_scaffold_105_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32455..33120)
DNA (666bp) protein (222aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX49_BIFLJ
gidB; methyltransferase GidB
L2_057_045G1_scaffold_105_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33269..33802)
DNA (534bp) protein (178aa)
R3H domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=C2GY43_BIFLN
R3H domain protein {ECO:0000313|EMBL:EEI79928.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
single-stranded nucleic acid-binding R3H domain-containing protein
L2_057_045G1_scaffold_105_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33925..34932)
DNA (1008bp) protein (336aa)
YidC2 n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R1N7_BIFLM
yidC2; yidc2
Membrane protein {ECO:0000313|EMBL:KEY30884.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_057_045G1_scaffold_105_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35243..35602)
DNA (360bp) protein (120aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Ribonuclease P protein component n=17 Tax=Bifidobacterium RepID=RNPA_BIFLD
ribonuclease P
L2_057_045G1_scaffold_105_28
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(35635..35769)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=6 Tax=Bifidobacterium longum RepID=D6DAZ7_BIFLN
LSU ribosomal protein L34P
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
L2_057_045G1_scaffold_105_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36088..37590
DNA (1503bp) protein (501aa)
Chromosomal replication initiator protein DnaA n=16 Tax=Bifidobacterium RepID=DNAA_BIFLD
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_057_045G1_scaffold_105_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38325..39449
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
DNA polymerase III subunit beta n=17 Tax=Bifidobacterium RepID=B3DP21_BIFLD
DNA polymerase III subunit beta
Displaying items 1-30 of 37 in total

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