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L2_057_048G1_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 237 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_048G1_scaffold_5_1
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(502..1230)
DNA (729bp) protein (243aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI90919.1}; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
L2_057_048G1_scaffold_5_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1433..3217
DNA (1785bp) protein (595aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Proline--tRNA ligase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPG9_BIFLS
prolyl-tRNA synthetase
L2_057_048G1_scaffold_5_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3493..4230
DNA (738bp) protein (246aa)
SSB3 n=9 Tax=Bifidobacterium RepID=E4R3W0_BIFLM
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KEY33490.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
ssb3; ssb3
L2_057_048G1_scaffold_5_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4313..6487)
DNA (2175bp) protein (725aa)
Neutral endopeptidase n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DR70_BIFLD
Neutral endopeptidase {ECO:0000313|EMBL:ACD99353.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
pepO; neutral endopeptidase
L2_057_048G1_scaffold_5_5
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6664..7644
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NFE2_9BIFI
hdeD; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96036.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_057_048G1_scaffold_5_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7925..9658
DNA (1734bp) protein (578aa)
PF08924 domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AR90_BIFLN
PF08924 domain protein {ECO:0000313|EMBL:EIJ32380.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
ybfG; hypothetical protein
L2_057_048G1_scaffold_5_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9723..10406
DNA (684bp) protein (228aa)
PF08924 domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AR90_BIFLN
PF08924 domain protein {ECO:0000313|EMBL:EIJ32380.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L2_057_048G1_scaffold_5_8
unknown

Not on your lists

10607..10840
DNA (234bp) protein (78aa)

This feature has no annotations

L2_057_048G1_scaffold_5_9
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10904..11917)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTQ5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR02104.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L2_057_048G1_scaffold_5_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12278..12937
DNA (660bp) protein (220aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Bifidobacterium RepID=C2GXY5_BIFLN
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EEI80002.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L2_057_048G1_scaffold_5_11
unknown

Not on your lists

13054..13230
DNA (177bp) protein (59aa)

This feature has no annotations

L2_057_048G1_scaffold_5_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13316..14098
DNA (783bp) protein (261aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Methionine aminopeptidase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPH3_BIFLS
methionine aminopeptidase
L2_057_048G1_scaffold_5_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14372..15664
DNA (1293bp) protein (431aa)
citrate synthase I (EC:2.3.3.1)
Citrate synthase n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DR73_BIFLD
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_057_048G1_scaffold_5_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15877..16896)
DNA (1020bp) protein (340aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; Tetrahydropicolinate succinylase {ECO:0000256|HAMAP-Rule:MF_02122}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ATD4_BIFLN
hypothetical protein
L2_057_048G1_scaffold_5_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16996..17145
DNA (150bp) protein (50aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=C2GVL1_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71722.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_057_048G1_scaffold_5_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17130..18215)
DNA (1086bp) protein (362aa)
Possible transcriptional regulator n=2 Tax=Bifidobacterium longum subsp. longum RepID=T2I422_BIFLN
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:KHD95698.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L2_057_048G1_scaffold_5_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18293..22486
DNA (4194bp) protein (1398aa)
Helicase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ATD6_BIFLN
Helicase {ECO:0000313|EMBL:KHD95699.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
helicase
L2_057_048G1_scaffold_5_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22676..23164
DNA (489bp) protein (163aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=B3DR77_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD99360.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_057_048G1_scaffold_5_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23137..23655)
DNA (519bp) protein (173aa)
Acetyltransferase, GNAT family n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BAF2_BIFLN
hypothetical protein
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EIJ28345.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_057_048G1_scaffold_5_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23738..24253
DNA (516bp) protein (172aa)
DNA mismatch endonuclease vsr n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPI0_BIFLS
DNA mismatch endonuclease vsr
DNA mismatch endonuclease vsr {ECO:0000313|EMBL:ACJ51710.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_057_048G1_scaffold_5_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24284..25339)
DNA (1056bp) protein (352aa)
MviM n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R3X2_BIFLM
mviM; mvim
Putative oxidoreductase {ECO:0000313|EMBL:BAJ67187.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_057_048G1_scaffold_5_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25433..26656
DNA (1224bp) protein (408aa)
Class I and II aminotransferase {ECO:0000313|EMBL:KFI73763.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KFI73763.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Aminotransferase, class I and II n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZVU2_BIFLJ
class I and II aminotransferase
L2_057_048G1_scaffold_5_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26834..27802
DNA (969bp) protein (323aa)
Exopolyphosphatase n=15 Tax=Bifidobacterium RepID=B3DRI3_BIFLD
exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:ACD99365.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_057_048G1_scaffold_5_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27818..28930)
DNA (1113bp) protein (371aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPI3_BIFLS
Endonuclease {ECO:0000313|EMBL:KEY28084.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
endonuclease/exonuclease/phosphatase
L2_057_048G1_scaffold_5_25
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29390..29794
DNA (405bp) protein (135aa)
Acetyltransferase n=10 Tax=Bifidobacterium RepID=B3DRI5_BIFLD
NH2-acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:CCY94868.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_057_048G1_scaffold_5_26
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29962..30390
DNA (429bp) protein (143aa)
Nucleoside 2-deoxyribosyltransferase n=14 Tax=Bifidobacterium RepID=D6DBP2_BIFLN
nucleoside 2-deoxyribosyltransferase
Putative nucleoside 2-deoxyribosyltransferase {ECO:0000313|EMBL:CCY94869.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_057_048G1_scaffold_5_27
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30559..31065
DNA (507bp) protein (169aa)
MscL n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MSY2_9BIFI
MscL {ECO:0000313|EMBL:CCY94870.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
large-conductance mechanosensitive channel
L2_057_048G1_scaffold_5_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31185..33050
DNA (1866bp) protein (622aa)
Long-chain-fatty-acid--CoA ligase n=2 Tax=Bifidobacterium longum RepID=S3EJY1_BIFLN
Putative long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:BAJ67180.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
long-chain-fatty-acid--CoA ligase
L2_057_048G1_scaffold_5_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33191..33715)
DNA (525bp) protein (175aa)
Flavodoxin-like protein n=2 Tax=Bifidobacterium longum RepID=C5EBN0_BIFLI
mdaB; NADPH-quinone reductase
Flavodoxin-like protein {ECO:0000313|EMBL:EEQ55424.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_057_048G1_scaffold_5_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33839..34141)
DNA (303bp) protein (101aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Exodeoxyribonuclease 7 small subunit n=4 Tax=Bifidobacterium longum RepID=B3DRJ0_BIFLD
exonuclease VII small subunit
Displaying items 1-30 of 237 in total

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