ggKbase home page

L2_057_048G1_scaffold_48

Search features with annotation key words

Displaying items 1-30 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_048G1_scaffold_48_1
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(338..2011)
DNA (1674bp) protein (558aa)
Putative alkyl hydroperoxide reductase F subunit n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FJI7_9CLOT
Putative alkyl hydroperoxide reductase F subunit {ECO:0000313|EMBL:CDG00839.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
putative thioredoxin reductase
L2_057_048G1_scaffold_48_2
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2119..2682)
DNA (564bp) protein (188aa)
ahpC; Alkyl hydroperoxide reductase subunit C (EC:1.11.1.15)
Putative Peroxiredoxin n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENI5_9CLOT
Putative Peroxiredoxin {ECO:0000313|EMBL:CDG00840.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
L2_057_048G1_scaffold_48_3
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2896..3249
DNA (354bp) protein (118aa)
ArsC family protein n=1 Tax=Clostridium intestinale URNW RepID=U2N631_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ85297.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
L2_057_048G1_scaffold_48_4
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3258..4025
DNA (768bp) protein (256aa)
UPF0246 protein Ftrac_0723 n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TRX4_MARTH
hypothetical protein
UPF0246 protein Ftrac_0723 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
L2_057_048G1_scaffold_48_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4038..4424
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR27253.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L2_057_048G1_scaffold_48_6
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4483..5283)
DNA (801bp) protein (267aa)
Helix-turn-helix domain, rpiR family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VD16_CLOBI
Helix-turn-helix domain, rpiR family protein {ECO:0000313|EMBL:EQK38626.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
RpiR family phosphosugar-binding transcriptional regulator
L2_057_048G1_scaffold_48_7
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5391..6035)
DNA (645bp) protein (215aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
N-acylglucosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Glycerol-3-phosphate responsive antiterminator family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VBX6_CLOBI
L2_057_048G1_scaffold_48_8
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6055..7545)
DNA (1491bp) protein (497aa)
PTS system, glucose-like IIB component domain protein {ECO:0000313|EMBL:EQK38624.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQK38624.1};; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
PTS system, glucose-like IIB component domain protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4V4I6_CLOBI
PTS system IIB component, Glc family
L2_057_048G1_scaffold_48_9
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7844..8224)
DNA (381bp) protein (127aa)
CotH protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KJ49_9FIRM
CotH protein
CotH protein {ECO:0000313|EMBL:AGL00520.1}; Flags: Precursor;; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
L2_057_048G1_scaffold_48_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8267..8644)
DNA (378bp) protein (126aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CU62_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14936.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_057_048G1_scaffold_48_11
Bacillus sonorensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8883..9716
DNA (834bp) protein (278aa)
Transcriptional antiterminator LicT n=1 Tax=Bacillus sonorensis L12 RepID=M5PDG1_9BACI
Transcriptional antiterminator LicT {ECO:0000313|EMBL:EME73752.1}; TaxID=1274524 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sonorensis L12.;"
licT; transcriptional antiterminator BglG family
L2_057_048G1_scaffold_48_12
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9913..11769
DNA (1857bp) protein (619aa)
bglP; PTS system beta-glucoside-specific EIIBCA component (EC:2.7.1.69)
PTS system beta-glucoside-specific EIIBCA component {ECO:0000313|EMBL:CDM68914.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDM68914.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
PTS system beta-glucoside-specific EIIBCA component BglP n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N256_9CLOT
L2_057_048G1_scaffold_48_13
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

11788..13218
DNA (1431bp) protein (477aa)
Aryl-phospho-beta-D-glucosidase BglH n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7V617_9FUSO
Aryl-phospho-beta-D-glucosidase BglH {ECO:0000313|EMBL:ERT66981.1}; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
glycoside hydrolase family 1
L2_057_048G1_scaffold_48_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13537..14337
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98065.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_057_048G1_scaffold_48_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15041..16405
DNA (1365bp) protein (455aa)
Radical SAM domain protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M0Y7_CLOB8
Radical SAM protein {ECO:0000313|EMBL:KJU71063.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
radical SAM additional 4Fe4S-binding SPASM domain protein
L2_057_048G1_scaffold_48_16
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16417..17643
DNA (1227bp) protein (409aa)
Zinc protease n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BU68_9CLOT
Zinc protease {ECO:0000313|EMBL:EOR20679.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
putative Zn-dependent peptidase
L2_057_048G1_scaffold_48_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17636..19051
DNA (1416bp) protein (472aa)
arginine decarboxylase (EC:4.1.1.19)
Orn/Lys/Arg decarboxylase, major domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q4G6_9CLOT
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EKY22507.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_057_048G1_scaffold_48_18
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19125..19967
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PPN9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA68893.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L2_057_048G1_scaffold_48_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20096..20992)
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BL09_CLOPF
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDS79439.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
LysR family transcriptional regulator
L2_057_048G1_scaffold_48_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21219..22919
DNA (1701bp) protein (567aa)
Pyridine nucleotide-disulphide oxidoreductase family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RI35_CLOPF
pyridine nucleotide-disulfide oxidoreductase
Pyridine nucleotide-disulphide oxidoreductase family protein {ECO:0000313|EMBL:ABG87087.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_057_048G1_scaffold_48_21
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23015..24268
DNA (1254bp) protein (418aa)
Transporter n=1 Tax=Clostridium ultunense Esp RepID=M1Z5N6_9CLOT
Transporter {ECO:0000313|EMBL:CCQ92858.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
transporter
L2_057_048G1_scaffold_48_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24359..25681
DNA (1323bp) protein (441aa)
Amino acid permease family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRA2_CLOPF
amino acid ABC transporter permease
Probable transporter {ECO:0000313|EMBL:BAB80442.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_057_048G1_scaffold_48_23
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25806..26612
DNA (807bp) protein (269aa)
GDSL-like protein n=2 Tax=Turicibacter RepID=D4W8X6_9FIRM
GDSL-like protein {ECO:0000313|EMBL:EFF62632.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
platelet activating factor acetylhydrolase-likeprotein
L2_057_048G1_scaffold_48_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26635..27069
DNA (435bp) protein (145aa)
UPI0003D62D00 related cluster n=1 Tax=unknown RepID=UPI0003D62D00
Uncharacterized protein {ECO:0000313|EMBL:ETI95788.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L2_057_048G1_scaffold_48_25
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27084..28484
DNA (1401bp) protein (467aa)
UPI0003D66786 related cluster n=1 Tax=unknown RepID=UPI0003D66786
Uncharacterized protein {ECO:0000313|EMBL:ETI95789.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
algI; alginate O-acetylation protein
L2_057_048G1_scaffold_48_26
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28505..29644
DNA (1140bp) protein (380aa)
DHHW family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VKI8_CLOBI
DHHW family protein {ECO:0000313|EMBL:EQK41177.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hypothetical protein
L2_057_048G1_scaffold_48_27
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30000..30413
DNA (414bp) protein (138aa)
Acetyltransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BZV9_9CLOT
Acetyltransferase {ECO:0000313|EMBL:EOR20491.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
acetyltransferase
L2_057_048G1_scaffold_48_28
unknown

Not on your lists

30404..30610
DNA (207bp) protein (69aa)

This feature has no annotations

L2_057_048G1_scaffold_48_29
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30896..31630
DNA (735bp) protein (245aa)
Putative Two component transcriptional regulator,LytTR family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EN00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ85290.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
response regulator
L2_057_048G1_scaffold_48_30
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31620..32843
DNA (1224bp) protein (408aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ85291.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
Displaying items 1-30 of 130 in total

View Taxonomy