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L2_057_048G1_scaffold_97

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_048G1_scaffold_97_1
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(134..1207)
DNA (1074bp) protein (358aa)
Spore coat protein, CotS family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TGX2_9CLOT
Spore coat protein, CotS family {ECO:0000313|EMBL:EKQ50315.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
spore coat protein, CotS family
L2_057_048G1_scaffold_97_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1393..2427
DNA (1035bp) protein (345aa)
Deoxynucleotide triphosphohydrolase family protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V2K6_CLOBA
deoxyguanosinetriphosphate triphosphohydrolase-like protein
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000313|EMBL:KIL09115.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_057_048G1_scaffold_97_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2574..4370
DNA (1797bp) protein (599aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
DNA primase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y224_9CLOT
dnaG; DNA primase
L2_057_048G1_scaffold_97_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4378..5487
DNA (1110bp) protein (370aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FL36_9CLOT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
rpoD; RNA polymerase sigma factor rpoD
L2_057_048G1_scaffold_97_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5576..6271
DNA (696bp) protein (232aa)
Bcl-2 family protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V2K9_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84531.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_057_048G1_scaffold_97_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6272..7066
DNA (795bp) protein (265aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QE99_9CLOT
NIF3 family protein
L2_057_048G1_scaffold_97_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8074..8286
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Listeria monocytogenes RepID=S5K1A2_LISMN
Uncharacterized protein {ECO:0000313|EMBL:KIN79885.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
L2_057_048G1_scaffold_97_8
unknown

Not on your lists

8451..8807
DNA (357bp) protein (119aa)

This feature has no annotations

L2_057_048G1_scaffold_97_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8862..9773)
DNA (912bp) protein (304aa)
Ribosomal protein L11 methyltransferase n=2 Tax=Clostridium botulinum B RepID=B2TMJ6_CLOBB
Uncharacterized protein {ECO:0000313|EMBL:KJU70822.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
methyltransferase small domain protein
L2_057_048G1_scaffold_97_10
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9882..10838
DNA (957bp) protein (319aa)
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MEH7_9CLOT
lactate dehydrogenase-like oxidoreductase
Lactate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:AGF54758.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_057_048G1_scaffold_97_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10864..11652)
DNA (789bp) protein (263aa)
Phosphatase YbjI n=2 Tax=Clostridium butyricum RepID=M8J9X4_CLOBU
Cof-like hydrolase {ECO:0000313|EMBL:ENZ35146.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
HAD hydrolase
L2_057_048G1_scaffold_97_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12170..13822
DNA (1653bp) protein (551aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
leuA3; 2-isopropylmalate synthase LeuA (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CA92_9CLOT
L2_057_048G1_scaffold_97_13
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13924..14559
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PGR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB89208.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
L2_057_048G1_scaffold_97_14
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14568..15431
DNA (864bp) protein (288aa)
peptidase S41 n=1 Tax=Clostridium sp. JC122 RepID=UPI00028897E8
Uncharacterized protein {ECO:0000313|EMBL:KEZ85049.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
L2_057_048G1_scaffold_97_15
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16007..17380
DNA (1374bp) protein (458aa)
Putative Sodium:alanine symporter family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EYI7_9CLOT
Putative Sodium:alanine symporter family protein {ECO:0000313|EMBL:CDG01366.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
amino acid ABC transporter
L2_057_048G1_scaffold_97_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17607..18545
DNA (939bp) protein (313aa)
Mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DFH6_CLODI
Mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein {ECO:0000313|EMBL:EQF26283.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
L2_057_048G1_scaffold_97_17
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(18630..19256)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y201_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ56176.1}; TaxID=160799 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
L2_057_048G1_scaffold_97_18
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19334..19606)
DNA (273bp) protein (91aa)
acyP; acylphosphatase AcyP (EC:3.6.1.7)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Acylphosphatase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N488_9CLOT
L2_057_048G1_scaffold_97_19
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19752..20180
DNA (429bp) protein (143aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
Nucleoside diphosphate kinase n=2 Tax=Clostridium RepID=A6M162_CLOB8
nucleoside-diphosphate kinase
L2_057_048G1_scaffold_97_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20278..21429)
DNA (1152bp) protein (384aa)
Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein n=4 Tax=Clostridium butyricum RepID=B1QXX8_CLOBU
bacterial extracellular solute-binding family protein
Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:AIY84899.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_057_048G1_scaffold_97_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21422..22219)
DNA (798bp) protein (266aa)
Spermidine/putrescine transport system permease protein PotC n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UZD3_CLOBO
spermidine/putrescine transport system permease protein PotC
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KIL09141.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_057_048G1_scaffold_97_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22213..23055)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4L3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98771.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
binding--dependent transport system inner membrane component family protein
L2_057_048G1_scaffold_97_23
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23057..24097)
DNA (1041bp) protein (347aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
spermidine/putrescine import ATP-binding protein PotA (EC:3.6.3.31)
Putative Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EJE9_9CLOT
L2_057_048G1_scaffold_97_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24126..24680)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98769.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
DNA-binding protein
L2_057_048G1_scaffold_97_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25025..26038
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WGH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU70841.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
acetyltransferase domain protein
L2_057_048G1_scaffold_97_26
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26102..26944
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI00030BA3BF
Uncharacterized protein {ECO:0000313|EMBL:AJH01280.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L2_057_048G1_scaffold_97_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27078..28478)
DNA (1401bp) protein (467aa)
sodium:alanine symporter n=1 Tax=Clostridium botulinum RepID=UPI0002E61931
amino acid carrier protein AlsT
Amino acid carrier protein AlsT {ECO:0000313|EMBL:ACD24476.1}; Putative sodium:alanine symporter {ECO:0000313|EMBL:CDH89922.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_057_048G1_scaffold_97_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28768..31299)
DNA (2532bp) protein (844aa)
Multimodular transpeptidase-transglycosylase {ECO:0000313|EMBL:KJZ83196.1}; EC=2.4.1.129 {ECO:0000313|EMBL:KJZ83196.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Penicillin-binding protein, 1A family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K3S4_CLOBU
membrane carboxypeptidase MrcB
L2_057_048G1_scaffold_97_29
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31396..32046
DNA (651bp) protein (217aa)
Sporulation protein YunB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MMW0_CLOSA
yunB; sporulation protein YunB
Sporulation protein YunB {ECO:0000313|EMBL:AGX42144.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_057_048G1_scaffold_97_30
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32331..32855)
DNA (525bp) protein (175aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Clostridium intestinale URNW RepID=U2Q512_9CLOT
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:ERK31209.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
Displaying items 1-30 of 60 in total

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