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L2_057_048G1_scaffold_144

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_048G1_scaffold_144_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(134..2764)
DNA (2631bp) protein (877aa)
ppdK; pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q4T0_9CLOT
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EKY22720.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_057_048G1_scaffold_144_2
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2841..3476)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y334_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ02192.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
ccpN; transcriptional repressor CcpN
L2_057_048G1_scaffold_144_3
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3668..4285)
DNA (618bp) protein (206aa)
Ubiquitin-associated-domain-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MCG7_9CLOT
Ubiquitin-associated-domain-containing protein {ECO:0000313|EMBL:EHI98079.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_057_048G1_scaffold_144_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4287..5042)
DNA (756bp) protein (252aa)
DNA repair protein RecO n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EJC2_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
recO; DNA repair protein RecO
L2_057_048G1_scaffold_144_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5054..5944)
DNA (891bp) protein (297aa)
GTPase Era n=2 Tax=Clostridium botulinum B RepID=ERA_CLOBB
era; GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L2_057_048G1_scaffold_144_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5953..6351)
DNA (399bp) protein (133aa)
cdd; cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase {ECO:0000313|EMBL:AIY84627.1}; EC=3.5.4.5 {ECO:0000313|EMBL:AIY84627.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Cytidine deaminase n=6 Tax=Clostridium perfringens RepID=H7CY42_CLOPF
L2_057_048G1_scaffold_144_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6431..7132)
DNA (702bp) protein (234aa)
Putative Diacylglycerol kinase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FL21_9CLOT
Putative Diacylglycerol kinase {ECO:0000313|EMBL:CDG01344.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
diacylglycerol kinase
L2_057_048G1_scaffold_144_8
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7158..7658)
DNA (501bp) protein (167aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
Endoribonuclease YbeY n=1 Tax=Clostridium sp. CAG:265 RepID=R6LN65_9CLOT
putative metalloprotease
L2_057_048G1_scaffold_144_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7714..9780)
DNA (2067bp) protein (689aa)
Membrane protein containing HD superfamily hydrolase domain n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V2J7_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83981.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_057_048G1_scaffold_144_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9814..10941)
DNA (1128bp) protein (376aa)
Sporulation protein YqfD n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNL2_CLOSA
yqfD; sporulation protein YqfD
Sporulation protein YqfD {ECO:0000313|EMBL:AGX42103.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_057_048G1_scaffold_144_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10932..11225)
DNA (294bp) protein (98aa)
Sporulation protein YqfC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG02_9CLOT
Sporulation protein YqfC {ECO:0000313|EMBL:EEH98820.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
yqfC; sporulation protein YqfC
L2_057_048G1_scaffold_144_12
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11413..11865)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FL13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG01339.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
yqey-like family protein
L2_057_048G1_scaffold_144_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11896..12072)
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=5 Tax=Clostridium RepID=A6LRP2_CLOB8
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_057_048G1_scaffold_144_14
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12194..12538)
DNA (345bp) protein (115aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TU69_9CLOT
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:EKQ50332.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
L2_057_048G1_scaffold_144_15
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12567..13874)
DNA (1308bp) protein (436aa)
mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB (EC:2.-.-.-)
Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB {ECO:0000313|EMBL:AGF54700.1}; EC=2.-.-.- {ECO:0000313|EMBL:AGF54700.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LPD5_9CLOT
L2_057_048G1_scaffold_144_16
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13874..14635)
DNA (762bp) protein (254aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
rsmE; ribosomal RNA small subunit methyltransferase E (EC:2.1.1.193)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EPZ0_9CLOT
L2_057_048G1_scaffold_144_17
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14652..15593)
DNA (942bp) protein (314aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FL09_9CLOT
prmA; ribosomal protein L11 methyltransferase
L2_057_048G1_scaffold_144_18
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15717..17279)
DNA (1563bp) protein (521aa)
Putative Nitrite/sulfite reductase ferredoxin domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EJA6_9CLOT
Putative Nitrite/sulfite reductase ferredoxin domain protein {ECO:0000313|EMBL:CDG01332.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
ferredoxin-nitrite reductase
L2_057_048G1_scaffold_144_19
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17424..18551)
DNA (1128bp) protein (376aa)
Chaperone protein DnaJ n=1 Tax=Clostridium sp. CAG:221 RepID=R6FU95_9CLOT
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
dnaJ; chaperone protein DnaJ
L2_057_048G1_scaffold_144_20
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18651..20510)
DNA (1860bp) protein (620aa)
Chaperone protein DnaK n=1 Tax=Clostridium colicanis 209318 RepID=N9Y239_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
dnaK; chaperone protein DnaK
L2_057_048G1_scaffold_144_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20575..21189)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG08_9CLOT
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
grpE; heat shock protein GrpE
L2_057_048G1_scaffold_144_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21219..22250)
DNA (1032bp) protein (344aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q561_9CLOT
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hrcA; heat-inducible transcription repressor HrcA
L2_057_048G1_scaffold_144_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22424..23548)
DNA (1125bp) protein (375aa)
hemN; oxygen-independent coproporphyrinogen-III oxidase 1 (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V4_9CLOT
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EEH98832.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L2_057_048G1_scaffold_144_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23604..24041)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H586_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99578.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_057_048G1_scaffold_144_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24125..24394)
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0SRD9_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87598.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_057_048G1_scaffold_144_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24616..26421)
DNA (1806bp) protein (602aa)
lepA; elongation factor 4 (EC:3.6.5.n1)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Elongation factor 4 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRN3_CLOSA
L2_057_048G1_scaffold_144_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26549..26875)
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TLZ2_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY81755.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L2_057_048G1_scaffold_144_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26940..27989)
DNA (1050bp) protein (350aa)
Stage II sporulation protein P n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V6_9CLOT
Stage II sporulation protein P {ECO:0000313|EMBL:EEH98837.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
stage II sporulation P family protein
L2_057_048G1_scaffold_144_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28069..29043)
DNA (975bp) protein (325aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
gpr; GPR endopeptidase (EC:3.4.24.78)
GPR endopeptidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B5_9CLOT
L2_057_048G1_scaffold_144_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


29217..29480
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=2 Tax=Clostridium botulinum E RepID=RS20_CLOBA
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500, ECO:0000313|EMBL:KIL09086.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
Displaying items 1-30 of 74 in total

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