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L2_057_048G1_scaffold_205

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_048G1_scaffold_205_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(254..904)
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Ribulose-phosphate 3-epimerase n=3 Tax=Veillonella RepID=D1YR19_9FIRM
ribulose-phosphate 3-epimerase
L2_057_048G1_scaffold_205_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(906..1769)
DNA (864bp) protein (288aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Putative ribosome biogenesis GTPase RsgA n=3 Tax=Veillonella RepID=T0SVS3_9FIRM
ribosome small subunit-dependent GTPase A
L2_057_048G1_scaffold_205_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1778..3712)
DNA (1935bp) protein (645aa)
Kinase domain protein n=4 Tax=Veillonella RepID=D1YR17_9FIRM
Serine/threonine protein kinase with PASTA sensorS {ECO:0000313|EMBL:ETI97820.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
serine/threonine protein kinase with PASTA sensor(s)
L2_057_048G1_scaffold_205_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3731..4432)
DNA (702bp) protein (234aa)
Protein serine/threonine phosphatase n=4 Tax=Veillonella RepID=D1BMC6_VEIPT
protein serine/threonine phosphatase
Putative serine/threonine phosphatase stp {ECO:0000313|EMBL:EGL78211.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
L2_057_048G1_scaffold_205_5
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4425..5471)
DNA (1047bp) protein (349aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T2Z6_9FIRM
radical SAM enzyme, Cfr family
L2_057_048G1_scaffold_205_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5490..6845)
DNA (1356bp) protein (452aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Ribosomal RNA small subunit methyltransferase n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T2L4_9FIRM
sun protein
L2_057_048G1_scaffold_205_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6826..7620)
DNA (795bp) protein (265aa)
Uncharacterized protein n=4 Tax=Veillonella RepID=D1BMC3_VEIPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETI97824.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
L2_057_048G1_scaffold_205_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7604..8614)
DNA (1011bp) protein (337aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Methionyl-tRNA formyltransferase n=2 Tax=Veillonella parvula RepID=T0U6L3_9FIRM
methionyl-tRNA formyltransferase
L2_057_048G1_scaffold_205_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8607..9095)
DNA (489bp) protein (163aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Peptide deformylase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMC1_VEIPT
peptide deformylase
L2_057_048G1_scaffold_205_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9109..11292)
DNA (2184bp) protein (728aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Primosomal protein N n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YR10_9FIRM
primosomal protein N'
L2_057_048G1_scaffold_205_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11355..12545)
DNA (1191bp) protein (397aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
S-adenosylmethionine synthase n=6 Tax=Veillonella RepID=D1BMB9_VEIPT
S-adenosylmethionine synthetase
L2_057_048G1_scaffold_205_12
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12740..13924)
DNA (1185bp) protein (395aa)
Sulfate permease family protein n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KHJ4_9FIRM
Sulfate permease family protein {ECO:0000313|EMBL:EFG23591.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
sulfate transporter
L2_057_048G1_scaffold_205_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13915..14403)
DNA (489bp) protein (163aa)
Sulfate permease family protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KMQ3_9FIRM
Sulfate permease {ECO:0000313|EMBL:EQC65520.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
sulfate transporter
L2_057_048G1_scaffold_205_14
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14445..15650)
DNA (1206bp) protein (402aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KMQ2_9FIRM
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EFG25379.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
L2_057_048G1_scaffold_205_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15703..15918)
DNA (216bp) protein (72aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
DNA-directed RNA polymerase subunit omega n=6 Tax=Veillonella RepID=D1BMB6_VEIPT
DNA-directed RNA polymerase subunit omega
L2_057_048G1_scaffold_205_16
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15923..16552)
DNA (630bp) protein (210aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
Guanylate kinase n=4 Tax=Veillonella RepID=T0T2K7_9FIRM
guanylate kinase
L2_057_048G1_scaffold_205_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16561..16830)
DNA (270bp) protein (90aa)
UPF0296 protein Vpar_0840 n=7 Tax=Veillonella RepID=D1BMB4_VEIPT
hypothetical protein
UPF0296 protein HMPREF9323_0506 {ECO:0000256|HAMAP-Rule:MF_01503}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
L2_057_048G1_scaffold_205_18
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16845..17726)
DNA (882bp) protein (294aa)
Protein YicC n=3 Tax=Veillonella RepID=D6KMP8_9FIRM
Protein YicC {ECO:0000313|EMBL:EFG25375.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
hypothetical protein
L2_057_048G1_scaffold_205_19
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17854..19569
DNA (1716bp) protein (572aa)
UPI0003D67E7F related cluster n=1 Tax=unknown RepID=UPI0003D67E7F
Uncharacterized protein {ECO:0000313|EMBL:ETI97530.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
fibronectin-binding A domain-containing protein
L2_057_048G1_scaffold_205_20
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19745..20203)
DNA (459bp) protein (153aa)
Uncharacterized protein n=7 Tax=Veillonella RepID=D1BMB1_VEIPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQC65511.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
L2_057_048G1_scaffold_205_21
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20215..20706)
DNA (492bp) protein (164aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
Phosphopantetheine adenylyltransferase n=5 Tax=Veillonella RepID=D1BMB0_VEIPT
pantetheine-phosphate adenylyltransferase
L2_057_048G1_scaffold_205_22
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20711..21262)
DNA (552bp) protein (184aa)
Ribosomal RNA small subunit methyltransferase n=3 Tax=Veillonella RepID=T0U6K3_9FIRM
Methyltransferase {ECO:0000313|EMBL:ETI97527.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
methyltransferase
L2_057_048G1_scaffold_205_23
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21330..22328)
DNA (999bp) protein (333aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=3 Tax=Veillonella RepID=D1YMI2_9FIRM
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein
L2_057_048G1_scaffold_205_24
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22332..22928)
DNA (597bp) protein (199aa)
Glycerol-3-phosphate acyltransferase n=3 Tax=Veillonella RepID=T0T2X4_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L2_057_048G1_scaffold_205_25
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22928..24262)
DNA (1335bp) protein (445aa)
GTPase Der n=3 Tax=Veillonella RepID=T0T2K0_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
small GTP-binding protein
L2_057_048G1_scaffold_205_26
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24376..25527)
DNA (1152bp) protein (384aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|SAAS:SAAS00096570};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KYC4_9FIRM
hydroxymethylbutenyl pyrophosphate reductase
Displaying 26 items

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