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L2_057_244G1_scaffold_63

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_244G1_scaffold_63_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(241..639)
DNA (399bp) protein (133aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SJI1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95797.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_057_244G1_scaffold_63_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(643..1332)
DNA (690bp) protein (230aa)
Glycosyltransferase, group 2 family protein n=4 Tax=Clostridium RepID=E9SJI0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95798.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Glycosyltransferases involved in cell wall biogenesis
L2_057_244G1_scaffold_63_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1412..2371)
DNA (960bp) protein (320aa)
Glycosyltransferase, group 2 family protein n=2 Tax=Clostridium symbiosum RepID=U2D0U3_CLOSY
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:ERI75077.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L2_057_244G1_scaffold_63_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2499..3335)
DNA (837bp) protein (279aa)
Glycosyl transferase family 2 n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GHG7_CLOSY
Glycosyl transferase family 2 {ECO:0000313|EMBL:EGA95800.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Glycosyl transferase family 2.
L2_057_244G1_scaffold_63_5
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3390..5363)
DNA (1974bp) protein (658aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FEA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05176.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_057_244G1_scaffold_63_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5495..6214)
DNA (720bp) protein (240aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SJH6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05177.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
nucleotidyl transferase
L2_057_244G1_scaffold_63_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6211..7302)
DNA (1092bp) protein (364aa)
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase n=3 Tax=Clostridium RepID=E7GHH0_CLOSY
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase {ECO:0000313|EMBL:EGA95803.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
L2_057_244G1_scaffold_63_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7299..8594)
DNA (1296bp) protein (432aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SJH4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05179.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_057_244G1_scaffold_63_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8645..9583)
DNA (939bp) protein (313aa)
LPS biosynthesis protein (EC:2.7.8.-)
LICD family protein n=2 Tax=Clostridium symbiosum RepID=E9SJH3_CLOSY
LICD family protein {ECO:0000313|EMBL:ERI75069.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L2_057_244G1_scaffold_63_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9573..10682)
DNA (1110bp) protein (370aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BTC4_CLOSY
UDP-galactopyranose mutase {ECO:0000313|EMBL:ERI75068.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L2_057_244G1_scaffold_63_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11025..11513
DNA (489bp) protein (163aa)
HD domain-containing protein n=3 Tax=Clostridium RepID=E7GHH4_CLOSY
HD domain-containing protein {ECO:0000313|EMBL:EGA95807.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
HD domain.
L2_057_244G1_scaffold_63_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11731..14226)
DNA (2496bp) protein (832aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GHH5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05183.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
DNA or RNA helicases of superfamily II
L2_057_244G1_scaffold_63_13
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14193..14783)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FEB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05184.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Methyltransferase domain.
L2_057_244G1_scaffold_63_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15290..15511)
DNA (222bp) protein (74aa)
Transcriptional regulator, GntR family n=3 Tax=Clostridium RepID=E9SJG6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95811.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
GntR family transcriptional regulator
L2_057_244G1_scaffold_63_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15751..17034
DNA (1284bp) protein (428aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FEB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05186.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_057_244G1_scaffold_63_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17294..18961)
DNA (1668bp) protein (556aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
2-isopropylmalate synthase, yeast type (EC:2.3.3.13)
2-isopropylmalate synthase n=3 Tax=Clostridium RepID=E9SJG4_CLOSY
L2_057_244G1_scaffold_63_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19143..20060)
DNA (918bp) protein (306aa)
LD-carboxypeptidase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SJG3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05189.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
LD-carboxypeptidase family protein
L2_057_244G1_scaffold_63_18
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20169..21509)
DNA (1341bp) protein (447aa)
MATE efflux family protein n=3 Tax=Clostridium RepID=U2D0R7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05190.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative efflux protein, MATE family
L2_057_244G1_scaffold_63_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21791..23506)
DNA (1716bp) protein (572aa)
Carbon starvation protein CstA n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D687_CLOSY
Carbon starvation protein CstA {ECO:0000313|EMBL:ERI75051.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Carbon starvation protein, predicted membrane protein
L2_057_244G1_scaffold_63_20
unknown

Not on your lists

comp(23564..23923)
DNA (360bp) protein (120aa)

This feature has no annotations

L2_057_244G1_scaffold_63_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24064..25485)
DNA (1422bp) protein (474aa)
PhoH family protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BS49_CLOSY
PhoH family protein {ECO:0000313|EMBL:ERI75050.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Predicted ATPase related to phosphate starvation-inducible protein PhoH
L2_057_244G1_scaffold_63_22
unknown

Not on your lists

comp(25882..26070)
DNA (189bp) protein (63aa)

This feature has no annotations

L2_057_244G1_scaffold_63_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26039..26743)
DNA (705bp) protein (235aa)
ABC transporter, ATP-binding protein n=4 Tax=Clostridium RepID=E9SJF9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95818.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC transporter-like protein
L2_057_244G1_scaffold_63_24
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26727..27497)
DNA (771bp) protein (257aa)
ABC transporter, ATP-binding protein n=3 Tax=Clostridium RepID=E9SJF8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05194.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
branched-chain amino acid ABC transporter
L2_057_244G1_scaffold_63_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27490..28380)
DNA (891bp) protein (297aa)
Branched-chain amino acid ABC transporter, permease protein n=3 Tax=Clostridium RepID=E9SJF7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05195.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
amino acid ABC transporter
L2_057_244G1_scaffold_63_26
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28394..29269)
DNA (876bp) protein (292aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Clostridium RepID=E9SJF6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05196.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
amino acid ABC transporter
L2_057_244G1_scaffold_63_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29344..30609)
DNA (1266bp) protein (422aa)
Receptor family ligand-binding protein n=4 Tax=Clostridium RepID=E9SJF5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95822.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
amino acid ABC transporter substrate-binding protein
L2_057_244G1_scaffold_63_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31138..31413)
DNA (276bp) protein (92aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SJF4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI75041.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L2_057_244G1_scaffold_63_29
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31426..31686)
DNA (261bp) protein (87aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SJF3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05199.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_057_244G1_scaffold_63_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(31825..32217)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=4 Tax=Clostridium RepID=E7GHJ2_CLOSY
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
SSU ribosomal protein S9P
Displaying items 1-30 of 113 in total

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