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L2_057_244G1_scaffold_185

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_244G1_scaffold_185_1
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1..495)
DNA (495bp) protein (165aa)
Elongation factor Tu n=2 Tax=Megasphaera RepID=S7HSD2_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
elongation factor Tu (Fragment)
L2_057_244G1_scaffold_185_2
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(534..2606)
DNA (2073bp) protein (691aa)
Elongation factor G n=2 Tax=Megasphaera RepID=G0VNG3_MEGEL
elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L2_057_244G1_scaffold_185_3
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(2646..3116)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=4 Tax=Megasphaera RepID=G0VNG2_MEGEL
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L2_057_244G1_scaffold_185_4
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(3172..3543)
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=3 Tax=Megasphaera RepID=G0VNG1_MEGEL
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_057_244G1_scaffold_185_5
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3624..3869)
DNA (246bp) protein (82aa)
50S ribosomal protein L7 n=2 Tax=Megasphaera RepID=S7HP98_9FIRM
50S ribosomal protein L7 {ECO:0000313|EMBL:EPP18633.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
50S ribosomal protein L7
L2_057_244G1_scaffold_185_6
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4113..8363)
DNA (4251bp) protein (1417aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VNF9_MEGEL
DNA-directed RNA polymerase
L2_057_244G1_scaffold_185_7
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8390..12079)
DNA (3690bp) protein (1230aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
DNA-directed RNA polymerase subunit beta n=2 Tax=Megasphaera RepID=G0VNF8_MEGEL
DNA-directed RNA polymerase subunit beta
L2_057_244G1_scaffold_185_8
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12391..13647)
DNA (1257bp) protein (419aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Tyrosine--tRNA ligase n=2 Tax=Megasphaera RepID=S7HP24_9FIRM
tyrosyl-tRNA synthetase
L2_057_244G1_scaffold_185_9
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13743..15653)
DNA (1911bp) protein (637aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Fructose-1,6-bisphosphatase class 3 n=2 Tax=Megasphaera RepID=S7HP91_9FIRM
fructose-1
L2_057_244G1_scaffold_185_10
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16031..17380
DNA (1350bp) protein (450aa)
Glutamate dehydrogenase n=2 Tax=Megasphaera RepID=G0VNF4_MEGEL
glu/Leu/Phe/Val dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_057_244G1_scaffold_185_11
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17488..18663)
DNA (1176bp) protein (392aa)
Amidohydrolase n=2 Tax=Megasphaera RepID=S7HSE0_9FIRM
Amidohydrolase {ECO:0000313|EMBL:EPP18639.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
amidohydrolase
L2_057_244G1_scaffold_185_12
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18682..19629)
DNA (948bp) protein (316aa)
Auxin Efflux Carrier n=2 Tax=Megasphaera RepID=S7HP17_9FIRM
Auxin Efflux Carrier {ECO:0000313|EMBL:EPP18640.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
auxin Efflux Carrier
L2_057_244G1_scaffold_185_13
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19645..20427)
DNA (783bp) protein (261aa)
Carbon-nitrogen family hydrolase n=2 Tax=Megasphaera RepID=S7HPE7_9FIRM
Carbon-nitrogen family hydrolase {ECO:0000313|EMBL:EPP18641.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
carbon-nitrogen family hydrolase
L2_057_244G1_scaffold_185_14
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20595..21257
DNA (663bp) protein (221aa)
Uracil-DNA glycosylase n=3 Tax=Megasphaera RepID=S7HP87_9FIRM
uracil-DNA glycosylase
Uracil-DNA glycosylase {ECO:0000313|EMBL:CCC72978.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_057_244G1_scaffold_185_15
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21344..22573)
DNA (1230bp) protein (410aa)
4Fe-4S binding domain protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VNE9_MEGEL
(4Fe-4S)-binding protein
4Fe-4S binding domain protein {ECO:0000313|EMBL:CCC72977.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_057_244G1_scaffold_185_16
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22666..23313)
DNA (648bp) protein (216aa)
Cupin domain-containing protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MUY9_9FIRM
Cupin domain-containing protein {ECO:0000313|EMBL:CDF04166.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
cupin domain-containing protein
L2_057_244G1_scaffold_185_17
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24204..26405
DNA (2202bp) protein (734aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D1F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78168.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
S-layer protein
L2_057_244G1_scaffold_185_18
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26939..31036
DNA (4098bp) protein (1366aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BT02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX57329.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Hemagluttinin domain-containing protein
L2_057_244G1_scaffold_185_19
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31235..33091
DNA (1857bp) protein (619aa)
Amino acid transporter n=1 Tax=Megasphaera sp. BL7 RepID=S7HPL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EAX48795.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
hypothetical protein
L2_057_244G1_scaffold_185_20
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(33196..35220)
DNA (2025bp) protein (675aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HPU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP14320.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L2_057_244G1_scaffold_185_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35393..35881)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42498.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Acetyltransferase (GNAT) family.
L2_057_244G1_scaffold_185_22
Anaerovibrio lipolyticus, Anaerovibrio, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(35937..37163)
DNA (1227bp) protein (409aa)
Putative cystathionine beta-lyase PatB n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5ACX2_9FIRM
Aminotransferase {ECO:0000313|EMBL:KHM45074.1}; TaxID=82374 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaerovibrio.;" source="Anaerovibrio lipolyticus.;"
aminotransferase
L2_057_244G1_scaffold_185_23
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37403..38113
DNA (711bp) protein (237aa)
Helix-turn-helix domain-containing protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PXW5_9CLOT
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EET85903.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
helix-turn-helix domain-containing protein
L2_057_244G1_scaffold_185_24
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(38297..39445)
DNA (1149bp) protein (383aa)
Butyryl-CoA dehydrogenase n=2 Tax=Megasphaera RepID=S7HFQ9_9FIRM
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EPP14523.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
butyryl-CoA dehydrogenase
L2_057_244G1_scaffold_185_25
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(39637..40755)
DNA (1119bp) protein (373aa)
R-phenyllactate dehydratase n=3 Tax=Megasphaera RepID=S7HG50_9FIRM
R-phenyllactate dehydratase
Putative R-phenyllactate dehydratase {ECO:0000313|EMBL:CCC72968.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_057_244G1_scaffold_185_26
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(40755..42041)
DNA (1287bp) protein (429aa)
2-hydroxyglutaryl-CoA dehydratase D-component n=2 Tax=Megasphaera RepID=S7IX21_9FIRM
2-hydroxyglutaryl-CoA dehydratase D-component
2-hydroxyglutaryl-CoA dehydratase D-component {ECO:0000313|EMBL:EPP14525.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L2_057_244G1_scaffold_185_27
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(42063..42839)
DNA (777bp) protein (259aa)
(R)-2-hydroxyglutaryl-CoA dehydratase activator n=3 Tax=Megasphaera RepID=G0VND8_MEGEL
(R)-2-hydroxyglutaryl-CoA dehydratase activator
(R)-2-hydroxyglutaryl-CoA dehydratase activator {ECO:0000313|EMBL:CCC72966.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L2_057_244G1_scaffold_185_28
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(42864..43778)
DNA (915bp) protein (305aa)
Glyoxalase family protein n=3 Tax=Megasphaera RepID=G0VND7_MEGEL
glyoxalase family protein
Glyoxalase family protein {ECO:0000313|EMBL:EPP14527.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L2_057_244G1_scaffold_185_29
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(43807..45360)
DNA (1554bp) protein (518aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Acetate CoA-transferase YdiF n=2 Tax=Megasphaera RepID=S7HFR5_9FIRM
coenzyme A transferase
L2_057_244G1_scaffold_185_30
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(45889..47409)
DNA (1521bp) protein (507aa)
Transporter n=2 Tax=Megasphaera RepID=S7HG55_9FIRM
Transporter {ECO:0000313|EMBL:EPP14529.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
transporter
Displaying 30 items

View Taxonomy