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L2_057_244G1_scaffold_196

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_244G1_scaffold_196_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..2044)
DNA (2043bp) protein (681aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAR5_9FIRM
L2_057_244G1_scaffold_196_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2261..2806)
DNA (546bp) protein (182aa)
Signal peptide protein, YSIRK family n=2 Tax=Clostridiales RepID=U2BWD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34425.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_057_244G1_scaffold_196_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2799..3290)
DNA (492bp) protein (164aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Clostridiales RepID=H1CAF5_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO34424.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RNA polymerase sigma factor, sigma-70 family
L2_057_244G1_scaffold_196_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3421..4728)
DNA (1308bp) protein (436aa)
MATE efflux family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUW0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHM41522.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
MATE efflux family protein
L2_057_244G1_scaffold_196_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4921..6330)
DNA (1410bp) protein (470aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=2 Tax=Clostridiales RepID=H1CAF3_9FIRM
L2_057_244G1_scaffold_196_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6327..7058)
DNA (732bp) protein (244aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=2 Tax=Clostridiales RepID=H1CAF2_9FIRM
L2_057_244G1_scaffold_196_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7344..7838
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2D3J7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34420.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_057_244G1_scaffold_196_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8311..8790
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BW71_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56476.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_057_244G1_scaffold_196_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8838..9467)
DNA (630bp) protein (210aa)
Transferase hexapeptide repeat family phosphonate metabolim protein n=2 Tax=Clostridiales RepID=H1CAE9_9FIRM
Transferase hexapeptide repeat family phosphonate metabolim protein {ECO:0000313|EMBL:EHO34418.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
phosphonate metabolism protein
L2_057_244G1_scaffold_196_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9467..9994)
DNA (528bp) protein (176aa)
pgsA; phosphatidylglycerophosphate synthase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUS8_9FIRM
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EHM41528.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_057_244G1_scaffold_196_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9999..11318)
DNA (1320bp) protein (440aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUS9_9FIRM
hypothetical protein
L2_057_244G1_scaffold_196_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11332..11907)
DNA (576bp) protein (192aa)
Nitroreductase family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56472.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
NAD(P)H-flavin oxidoreductase
L2_057_244G1_scaffold_196_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11950..12597)
DNA (648bp) protein (216aa)
Regulatory protein RecX n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BW76_9CLOT
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
recX; regulatory protein RecX
L2_057_244G1_scaffold_196_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12584..13696)
DNA (1113bp) protein (371aa)
Protein RecA n=3 Tax=Clostridiales RepID=G9YUT2_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
recA; RecA protein
L2_057_244G1_scaffold_196_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13740..14603)
DNA (864bp) protein (288aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hemK; protein methyltransferase HemK (EC:2.1.1.-)
Release factor glutamine methyltransferase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAE3_9FIRM
L2_057_244G1_scaffold_196_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14773..15753)
DNA (981bp) protein (327aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2D990_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34411.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_057_244G1_scaffold_196_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15846..17273)
DNA (1428bp) protein (476aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative two-component histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Clostridiales RepID=U2D3K8_9CLOT
L2_057_244G1_scaffold_196_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17561..18247)
DNA (687bp) protein (229aa)
Putative sensory transduction protein RegX3 n=3 Tax=Clostridiales RepID=G9YUT6_9FIRM
Putative sensory transduction protein RegX3 {ECO:0000313|EMBL:EHM41536.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
OmpR family two-component response regulator
L2_057_244G1_scaffold_196_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18288..19667)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YUT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI76064.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_057_244G1_scaffold_196_20
unknown

Not on your lists

comp(20559..21215)
DNA (657bp) protein (219aa)

This feature has no annotations

L2_057_244G1_scaffold_196_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21364..22218)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM48702.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_057_244G1_scaffold_196_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22447..23217
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM48701.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
collagen triple helix repeat domain protein
L2_057_244G1_scaffold_196_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23277..24362
DNA (1086bp) protein (362aa)
Glycosyltransferase, group 2 family protein n=3 Tax=Clostridiales RepID=G9YRQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21329.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
glycosyl transferase
L2_057_244G1_scaffold_196_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24763..25020
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DJ97_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI79731.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_057_244G1_scaffold_196_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25057..25287
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56546.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_057_244G1_scaffold_196_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25325..26089)
DNA (765bp) protein (255aa)
TipAS antibiotic-recognition domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRR9_9FIRM
TipAS antibiotic-recognition domain protein {ECO:0000313|EMBL:EHM48696.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
mta; MerR family transcriptional regulator
L2_057_244G1_scaffold_196_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26217..26924
DNA (708bp) protein (236aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YRR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56544.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_057_244G1_scaffold_196_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26949..27707
DNA (759bp) protein (253aa)
4Fe-4S binding domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRR7_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EHM48694.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_057_244G1_scaffold_196_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27714..28043
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BUE1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75870.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_057_244G1_scaffold_196_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28113..29003)
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family n=2 Tax=Clostridiales RepID=G9YRR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21335.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
LysR family transcriptional regulator
Displaying items 1-30 of 51 in total

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