ggKbase home page

L2_057_244G1_scaffold_262

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_244G1_scaffold_262_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

107..1855
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1G870_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXZ42181.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
DNA primase
L2_057_244G1_scaffold_262_2
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1875..3452
DNA (1578bp) protein (526aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q8A6E2_BACTN
Uncharacterized protein {ECO:0000313|EMBL:EES67491.2}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L2_057_244G1_scaffold_262_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3484..4518
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IMB0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXZ86579.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
hypothetical protein
L2_057_244G1_scaffold_262_4
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4590..6206
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IMA9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES67489.2}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L2_057_244G1_scaffold_262_5
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6388..7038)
DNA (651bp) protein (217aa)
Resolvase domain n=10 Tax=Bacteroidales RepID=F9Z5Q1_ODOSD
Resolvase domain
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEX44057.1}; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii DSM 17565.;"
L2_057_244G1_scaffold_262_6
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7071..8474)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C3QLC2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO58657.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
hypothetical protein
L2_057_244G1_scaffold_262_7
Prevotella bivia, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8622..9026)
DNA (405bp) protein (135aa)
Transposase-like protein n=2 Tax=Prevotella bivia RepID=D1Y014_9BACT
Transposase {ECO:0000313|EMBL:EIM33482.1}; TaxID=868129 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella bivia DSM 20514.;"
transposase IS200-family protein
L2_057_244G1_scaffold_262_8

Not on your lists

9104..10342
DNA (1239bp) protein (413aa)
Transposase-like protein B n=1 Tax=gut metagenome RepID=J9H743_9ZZZZ
Transposase-like protein B {ECO:0000313|EMBL:EJX10015.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
transposase, IS891/IS1136/IS1341
L2_057_244G1_scaffold_262_9
Bacteroides helcogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10230..10610)
DNA (381bp) protein (127aa)
DNA-binding protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037EBD49
DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:ADV42884.1}; TaxID=693979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P; 36-108).;"
L2_057_244G1_scaffold_262_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10953..12581)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1G7Y0_BACFG
Type IV secretory system Conjugative DNA transfer family protein {ECO:0000313|EMBL:EXZ86000.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
mobilisation protein C
L2_057_244G1_scaffold_262_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12578..13507)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1GDV8_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA87622.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
mobilisation protein B
L2_057_244G1_scaffold_262_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13500..14084)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1GVN8_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXZ85998.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
L2_057_244G1_scaffold_262_13
unknown

Not on your lists

comp(14085..14189)
DNA (105bp) protein (35aa)

This feature has no annotations

L2_057_244G1_scaffold_262_14
unknown

Not on your lists

comp(14625..14741)
DNA (117bp) protein (39aa)

This feature has no annotations

L2_057_244G1_scaffold_262_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15247..16545
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1G0C9_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA87624.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
initiator RepB protein
L2_057_244G1_scaffold_262_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16532..17437
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1G2R4_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA87625.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
L2_057_244G1_scaffold_262_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17618..18070)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1G7Y8_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA87626.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
hypothetical protein
L2_057_244G1_scaffold_262_18
unknown

Not on your lists

comp(18079..18381)
DNA (303bp) protein (101aa)

This feature has no annotations

L2_057_244G1_scaffold_262_19
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18734..19510)
DNA (777bp) protein (259aa)
Type I restriction enzyme, M subunit n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IVB7_9BACE
Type I restriction enzyme, M subunit {ECO:0000313|EMBL:EFI07845.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
type I restriction enzyme, M subunit
L2_057_244G1_scaffold_262_20
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19519..19836)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=E4MCU9_9BACT
Protein of unknown function (DUF2958).
Uncharacterized protein {ECO:0000313|EMBL:CBK63703.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_057_244G1_scaffold_262_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20389..20553)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A7F7_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY83720.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L2_057_244G1_scaffold_262_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20573..20986)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CY40_BACPM
Uncharacterized protein {ECO:0000313|EMBL:KDS19829.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
hypothetical protein
L2_057_244G1_scaffold_262_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21048..22745)
DNA (1698bp) protein (566aa)
PRTRC system ParB family protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1GVS2_BACFG
ParB/RepB/Spo0J family partition domain protein {ECO:0000313|EMBL:EXZ42151.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
putative partitioning protein
L2_057_244G1_scaffold_262_24
unknown

Not on your lists

comp(23065..23205)
DNA (141bp) protein (47aa)

This feature has no annotations

L2_057_244G1_scaffold_262_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23225..23821)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1G827_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXZ42154.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
hypothetical protein
L2_057_244G1_scaffold_262_26
Robiginitalea biformata, Robiginitalea, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23895..24137)
DNA (243bp) protein (81aa)
Putative DNA-binding protein n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CLE1_ROBBH
DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:EAR15690.1}; TaxID=313596 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Robiginitalea.;" source="Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146).;"
L2_057_244G1_scaffold_262_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24134..24472)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1GVT0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXZ42156.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L2_057_244G1_scaffold_262_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24475..25002)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1G0H2_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA87659.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
peptidase
L2_057_244G1_scaffold_262_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25011..26210)
DNA (1200bp) protein (400aa)
Conjugative transposon TraN protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1G2W0_BACFG
Conjugative transposon TraN protein {ECO:0000313|EMBL:EXZ19975.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
conjugal transfer protein TraM
L2_057_244G1_scaffold_262_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26269..27324)
DNA (1056bp) protein (352aa)
Conjugative transposon TraM protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1G833_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXZ83934.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
TraM-like conjugate transposon protein
Displaying items 1-30 of 38 in total

View Taxonomy