ggKbase home page

L2_057_244G1_scaffold_265

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_244G1_scaffold_265_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1353..2057
DNA (705bp) protein (235aa)
Uncharacterized protein n=4 Tax=Bacteroides fragilis RepID=Q5LJ50_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ00597.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_057_244G1_scaffold_265_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2095..3138
DNA (1044bp) protein (348aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=Q650M5_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE58620.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L2_057_244G1_scaffold_265_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3373..4326
DNA (954bp) protein (318aa)
Hypothetical transmembrane protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LJ47_BACFN
Uncharacterized protein {ECO:0000313|EMBL:EXZ07515.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
hypothetical protein
L2_057_244G1_scaffold_265_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4328..4753
DNA (426bp) protein (142aa)
Hypothetical transmembrane protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LJ47_BACFN
Uncharacterized protein {ECO:0000313|EMBL:EXZ75478.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
hypothetical protein
L2_057_244G1_scaffold_265_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4830..5063
DNA (234bp) protein (78aa)
Putative exported protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LJ46_BACFN
hypothetical protein
NVEALA family protein {ECO:0000313|EMBL:EXZ07512.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
L2_057_244G1_scaffold_265_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5292..5543
DNA (252bp) protein (84aa)
Putative exported protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LJ41_BACFN
hypothetical protein
NVEALA family protein {ECO:0000313|EMBL:EXZ91768.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
L2_057_244G1_scaffold_265_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5616..6767
DNA (1152bp) protein (384aa)
Putative exported protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LJ40_BACFN
Putative exported protein {ECO:0000313|EMBL:EXZ30657.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
hypothetical protein
L2_057_244G1_scaffold_265_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6776..7645
DNA (870bp) protein (290aa)
Putative lipoprotein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LJ39_BACFN
Uncharacterized protein {ECO:0000313|EMBL:EYE58625.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
putative lipoprotein
L2_057_244G1_scaffold_265_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7688..8053
DNA (366bp) protein (122aa)
Putative exported protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LJ38_BACFN
Putative exported protein {ECO:0000313|EMBL:EYE58626.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
hypothetical protein
L2_057_244G1_scaffold_265_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8001..9284
DNA (1284bp) protein (428aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R5S2P9_9BACE
Putative exported protein {ECO:0000313|EMBL:EYE58627.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
hypothetical protein
L2_057_244G1_scaffold_265_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9238..9843
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LJ36_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ75483.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
L2_057_244G1_scaffold_265_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9840..11822
DNA (1983bp) protein (661aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LJ35_BACFN
Uncharacterized protein {ECO:0000313|EMBL:EYE58629.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
hypothetical protein
L2_057_244G1_scaffold_265_13
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11972..12871
DNA (900bp) protein (300aa)
Methyltransferase domain protein n=2 Tax=Bacteroides RepID=D1JQ92_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN09289.1}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
hypothetical protein
L2_057_244G1_scaffold_265_14
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12871..13752
DNA (882bp) protein (294aa)
Cell division protein FtsX n=14 Tax=Bacteroides RepID=E1WJU4_BACF6
ftsX; putative cell division protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L2_057_244G1_scaffold_265_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13793..14026
DNA (234bp) protein (78aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=K1G644_BACFG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ00603.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_057_244G1_scaffold_265_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14033..14833
DNA (801bp) protein (267aa)
putative undecaprenol kinase (EC:2.7.1.66)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
Undecaprenyl-diphosphatase n=6 Tax=Bacteroides RepID=UPPP_BACFN
L2_057_244G1_scaffold_265_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14841..15542
DNA (702bp) protein (234aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
tRNA pseudouridine synthase B n=14 Tax=Bacteroides RepID=TRUB_BACFN
putative tRNA pseudouridine synthase
L2_057_244G1_scaffold_265_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15591..16649
DNA (1059bp) protein (353aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=14 Tax=Bacteroides RepID=QUEA_BACFN
putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
L2_057_244G1_scaffold_265_19
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16649..17110
DNA (462bp) protein (154aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:EEZ25612.1}; EC=2.7.6.3 {ECO:0000313|EMBL:EEZ25612.1};; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JQ98_9BACE
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
L2_057_244G1_scaffold_265_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17090..17284)
DNA (195bp) protein (65aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=Q650L5_BACFR
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EXZ55779.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L2_057_244G1_scaffold_265_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17493..18785
DNA (1293bp) protein (431aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; S-adenosylmethionine synthase; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
S-adenosylmethionine synthase n=7 Tax=Bacteroides RepID=METK_BACFN
metK; putative S-adenosylmethionine synthetase
L2_057_244G1_scaffold_265_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18926..19513
DNA (588bp) protein (196aa)
TIGR00730 family protein n=5 Tax=Bacteroides RepID=D1JQA1_9BACE
Putative lysine decarboxylase family protein {ECO:0000313|EMBL:EXZ46720.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
putative lysine decarboxylase
L2_057_244G1_scaffold_265_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19510..20340
DNA (831bp) protein (277aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C6I309_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ00611.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_057_244G1_scaffold_265_24
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20345..21097
DNA (753bp) protein (251aa)
Possible uroporphyrinogen-III synthase n=14 Tax=Bacteroides RepID=E1WJV3_BACF6
uroporphyrinogen-III synthase
Possible uroporphyrinogen-III synthase {ECO:0000313|EMBL:CDD43155.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L2_057_244G1_scaffold_265_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21188..21568
DNA (381bp) protein (127aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
Ribonuclease P protein component n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LJ21_9BACE
ribonuclease P component
L2_057_244G1_scaffold_265_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21565..21786
DNA (222bp) protein (74aa)
Putative membrane protein insertion efficiency factor n=15 Tax=Bacteroides RepID=YIDD_BACFN
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L2_057_244G1_scaffold_265_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21793..22428
DNA (636bp) protein (212aa)
TatD-related DNase n=13 Tax=Bacteroides RepID=Q650K8_BACFR
putative tatD-related DNAse protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ00615.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_057_244G1_scaffold_265_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22496..23788
DNA (1293bp) protein (431aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
Tyrosine--tRNA ligase n=7 Tax=Bacteroides RepID=SYY_BACFR
tyrosyl-tRNA synthetase
L2_057_244G1_scaffold_265_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23901..27173)
DNA (3273bp) protein (1091aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6I303_9BACE
putative peptidase/protease family protein
Peptidase S41 family protein {ECO:0000313|EMBL:EXZ55788.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L2_057_244G1_scaffold_265_30
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27252..27410)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis CAG:47 RepID=R6ZQ52_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD43161.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
Displaying items 1-30 of 37 in total

View Taxonomy