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L2_057_244G1_scaffold_135

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_244G1_scaffold_135_1
unknown

Not on your lists

comp(357..569)
DNA (213bp) protein (71aa)

This feature has no annotations

L2_057_244G1_scaffold_135_2
Lactobacillus ruminis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(679..1476)
DNA (798bp) protein (266aa)
Hypothetical membrane protein n=1 Tax=Lactobacillus ruminis (strain ATCC 27782 / RF3) RepID=G2SRT3_LACRR
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:AEN77748.1}; TaxID=1069534 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus ruminis (strain ATCC 27782 / RF3).;"
L2_057_244G1_scaffold_135_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1778..3058)
DNA (1281bp) protein (427aa)
Thermophilic metalloprotease (M29) n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECU4_9ACTN
Thermophilic metalloprotease (M29) {ECO:0000313|EMBL:EBA38629.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
aminopeptidase II
L2_057_244G1_scaffold_135_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3148..3723)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8J3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35200.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_057_244G1_scaffold_135_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3724..4611)
DNA (888bp) protein (296aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLQ5_9ACTN
L2_057_244G1_scaffold_135_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4721..6286)
DNA (1566bp) protein (522aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A1Z4_9ACTN
integral membrane sensor signal transduction histidine kinase
L2_057_244G1_scaffold_135_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6298..7020)
DNA (723bp) protein (241aa)
Response regulator receiver domain protein n=2 Tax=Collinsella RepID=A4ECU0_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA35203.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
two component transcriptional regulator, winged helix family
L2_057_244G1_scaffold_135_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7174..8385)
DNA (1212bp) protein (404aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECT9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75743.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_057_244G1_scaffold_135_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8385..8648)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECT8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38623.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_057_244G1_scaffold_135_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8777..10123)
DNA (1347bp) protein (449aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECT7_9ACTN
L2_057_244G1_scaffold_135_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11050..14481
DNA (3432bp) protein (1144aa)
TQXA domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECT6_9ACTN
TQXA domain protein {ECO:0000313|EMBL:EBA38621.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Cna B domain-containing protein
L2_057_244G1_scaffold_135_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14548..14766)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z5V2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35093.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_057_244G1_scaffold_135_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14788..17979)
DNA (3192bp) protein (1064aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECT5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38620.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_057_244G1_scaffold_135_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18178..19200
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECT4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38619.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
helix-turn-helix type 11 domain-containing protein
L2_057_244G1_scaffold_135_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19187..20104
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8A2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35090.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
protein pafC
L2_057_244G1_scaffold_135_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20101..22995)
DNA (2895bp) protein (965aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
Putative DnaQ family exonuclease/DinG family helicase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZEU7_9ACTN
Putative DnaQ family exonuclease/DinG family helicase {ECO:0000313|EMBL:CDA35089.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_057_244G1_scaffold_135_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22989..23954)
DNA (966bp) protein (322aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z5U7_9ACTN
L2_057_244G1_scaffold_135_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24040..25092
DNA (1053bp) protein (351aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECT0_9ACTN
L2_057_244G1_scaffold_135_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25290..25544)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFF8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75754.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_057_244G1_scaffold_135_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25534..26439)
DNA (906bp) protein (302aa)
ParB-like protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8Z2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75755.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
parB-like partition protein
L2_057_244G1_scaffold_135_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26432..27232)
DNA (801bp) protein (267aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=R5ZM18_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75756.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
chromosome segregation ATPase
L2_057_244G1_scaffold_135_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27367..28104)
DNA (738bp) protein (246aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECS6_9ACTN
methyltransferase GidB
L2_057_244G1_scaffold_135_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28201..28770)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6I4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35323.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
single-stranded nucleic acid binding R3H domain-containing protein
L2_057_244G1_scaffold_135_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28815..29585)
DNA (771bp) protein (257aa)
Membrane protein insertase, YidC/Oxa1 family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECS4_9ACTN
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:EBA38609.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
YidC/Oxa1 family membrane protein insertase
L2_057_244G1_scaffold_135_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29615..29839)
DNA (225bp) protein (75aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8Z7_9ACTN
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_057_244G1_scaffold_135_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29836..30174)
DNA (339bp) protein (113aa)
Ribonuclease P protein component {ECO:0000256|SAAS:SAAS00143752}; EC=3.1.26.5 {ECO:0000256|SAAS:SAAS00143815};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Ribonuclease P protein component n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECS3_9ACTN
ribonuclease P protein component
L2_057_244G1_scaffold_135_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(30195..30350)
DNA (156bp) protein (52aa)
50S ribosomal protein L34 n=3 Tax=Collinsella RepID=A4ECS2_9ACTN
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
LSU ribosomal protein L34P
L2_057_244G1_scaffold_135_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30675..32027
DNA (1353bp) protein (451aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6I9_9ACTN
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDA35328.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ATP-binding region ATPase domain-containing protein
L2_057_244G1_scaffold_135_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32043..33767
DNA (1725bp) protein (575aa)
Chromosomal replication initiator protein dnaA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECS0_9ACTN
Chromosomal replication initiator protein dnaA {ECO:0000256|RuleBase:RU000577}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
chromosomal replication initiator protein DnaA
L2_057_244G1_scaffold_135_30
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34006..35109
DNA (1104bp) protein (368aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFJ5_9ACTN
Displaying items 1-30 of 51 in total

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