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L2_057_244G1_scaffold_216

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_244G1_scaffold_216_1
unknown

Not on your lists

487..678
DNA (192bp) protein (64aa)

This feature has no annotations

L2_057_244G1_scaffold_216_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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943..1374
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZC53_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36450.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
heat shock protein Hsp20
L2_057_244G1_scaffold_216_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1457..2266)
DNA (810bp) protein (270aa)
Metallo-beta-lactamase domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB61_9ACTN
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EBA39065.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
beta-lactamase domain-containing protein
L2_057_244G1_scaffold_216_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2315..3853
DNA (1539bp) protein (513aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A5R3_9ACTN
tRNA(Ile)-lysidine synthetase
L2_057_244G1_scaffold_216_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4001..4549
DNA (549bp) protein (183aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9S2_9ACTN
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDA36453.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_057_244G1_scaffold_216_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4551..6680
DNA (2130bp) protein (710aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIM1_9ACTN
L2_057_244G1_scaffold_216_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6771..8054
DNA (1284bp) protein (428aa)
Aminotransferase class I/II n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZC58_9ACTN
Aminotransferase class I/II {ECO:0000313|EMBL:CDA36455.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
class I and II aminotransferase
L2_057_244G1_scaffold_216_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8220..9041
DNA (822bp) protein (274aa)
Putative hydrolase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQ02_9ACTN
Putative hydrolase {ECO:0000313|EMBL:CDA36456.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
PHP domain-containing protein
L2_057_244G1_scaffold_216_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9120..10568)
DNA (1449bp) protein (483aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Collinsella sp. CAG:166 RepID=R6A5R8_9ACTN
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:KGI72757.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
RNA methyltransferase, TrmA family
L2_057_244G1_scaffold_216_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10907..11767
DNA (861bp) protein (287aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB68_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EBA39072.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
family 3 extracellular solute-binding protein
L2_057_244G1_scaffold_216_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11767..12420
DNA (654bp) protein (218aa)
ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB69_9ACTN
ABC transporter, permease protein {ECO:0000313|EMBL:EBA39073.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter permease component
L2_057_244G1_scaffold_216_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12413..13177
DNA (765bp) protein (255aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB70_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72760.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter-like protein
L2_057_244G1_scaffold_216_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13488..15563
DNA (2076bp) protein (692aa)
Putative translation elongation factor G n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZC65_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72761.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
translation elongation factor 2 (EF-2/EF-G)
L2_057_244G1_scaffold_216_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15693..16676)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9T4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36463.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_057_244G1_scaffold_216_15
unknown

Not on your lists

16689..16910
DNA (222bp) protein (74aa)

This feature has no annotations

L2_057_244G1_scaffold_216_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17154..18848
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLT5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72763.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
transcriptional regulator
L2_057_244G1_scaffold_216_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19145..20023)
DNA (879bp) protein (293aa)
Putative TIGR00268 family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z675_9ACTN
Putative TIGR00268 family protein {ECO:0000313|EMBL:CDA35223.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_057_244G1_scaffold_216_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20192..20842
DNA (651bp) protein (217aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB84_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72765.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
HAD family hydrolase
L2_057_244G1_scaffold_216_19
unknown

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21112..22107
DNA (996bp) protein (332aa)

This feature has no annotations

L2_057_244G1_scaffold_216_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22378..24225
DNA (1848bp) protein (616aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB86_9ACTN
L2_057_244G1_scaffold_216_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24340..25041)
DNA (702bp) protein (234aa)
Transcriptional regulator, GntR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB87_9ACTN
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EBA39091.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
GntR family transcriptional regulator
L2_057_244G1_scaffold_216_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25235..26269
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6N1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35373.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_057_244G1_scaffold_216_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26536..27753
DNA (1218bp) protein (406aa)
Transcriptional regulator, Fis family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB89_9ACTN
Transcriptional regulator, Fis family {ECO:0000313|EMBL:EBA39093.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Fis family sigma-54 specific transcriptional regulator
L2_057_244G1_scaffold_216_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27838..28413
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6N6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72724.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_057_244G1_scaffold_216_25
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28469..28990)
DNA (522bp) protein (174aa)
Nitroreductase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFP6_9ACTN
Nitroreductase family protein {ECO:0000313|EMBL:CDA35379.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Nitroreductase
L2_057_244G1_scaffold_216_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29285..29575
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=A4EB93_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39096.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_057_244G1_scaffold_216_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29743..30255
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZM65_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35381.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transcriptional regulator, MarR family
L2_057_244G1_scaffold_216_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30243..31979
DNA (1737bp) protein (579aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB95_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA39099.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter
L2_057_244G1_scaffold_216_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31981..33987
DNA (2007bp) protein (669aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB96_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72729.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L2_057_244G1_scaffold_216_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34099..34803)
DNA (705bp) protein (235aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A396_9ACTN
Displaying items 1-30 of 36 in total

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