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L2_059_000G1_scaffold_7005

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_7005_1
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..178
DNA (177bp) protein (59aa)
Membrane protein insertase YidC n=1 Tax=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) RepID=YIDC_SALAR
membrane protein insertase
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
L2_059_000G1_scaffold_7005_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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284..1648
DNA (1365bp) protein (455aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
tRNA modification GTPase MnmE n=3 Tax=Citrobacter freundii complex RepID=K8QUL9_CITFR
trmE; tRNA modification GTPase TrmE
L2_059_000G1_scaffold_7005_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1831..3012
DNA (1182bp) protein (394aa)
Multidrug resistance protein MdtL n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QQ29_CITFR
Multidrug resistance protein MdtL {ECO:0000256|HAMAP-Rule:MF_01530}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
multidrug transporter
L2_059_000G1_scaffold_7005_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2981..3940
DNA (960bp) protein (320aa)
HTH-type transcriptional regulator YidZ n=6 Tax=Citrobacter RepID=J0M0C9_9ENTR
HTH-type transcriptional regulator YidZ {ECO:0000256|HAMAP-Rule:MF_01607}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
L2_059_000G1_scaffold_7005_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4107..4853
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QL99_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC11892.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_000G1_scaffold_7005_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4884..5450
DNA (567bp) protein (189aa)
Nadph-dependent fmn reductase n=6 Tax=Citrobacter RepID=J1FY91_9ENTR
Putative oxidoreductase {ECO:0000313|EMBL:CDL40700.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
L2_059_000G1_scaffold_7005_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5505..6842)
DNA (1338bp) protein (446aa)
Adenine permease PurP n=3 Tax=Citrobacter RepID=K8QUL6_CITFR
Adenine permease PurP {ECO:0000313|EMBL:KJC11894.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
adenine permease PurP
L2_059_000G1_scaffold_7005_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7010..7297
DNA (288bp) protein (96aa)
6-phosphogluconate phosphatase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QQ24_CITFR
6-phosphogluconate phosphatase {ECO:0000313|EMBL:KJC04834.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
6-phosphogluconate phosphatase
L2_059_000G1_scaffold_7005_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7287..7490
DNA (204bp) protein (68aa)
6-phosphogluconate phosphatase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D3T2_CITFR
6-phosphogluconate phosphatase {ECO:0000313|EMBL:KJC11895.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
6-phosphogluconate phosphatase
L2_059_000G1_scaffold_7005_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7575..8300)
DNA (726bp) protein (242aa)
Phosphate-specific transport system accessory protein PhoU n=9 Tax=Enterobacteriaceae RepID=C1ME41_9ENTR
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
transcriptional regulator PhoU
L2_059_000G1_scaffold_7005_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8315..9088)
DNA (774bp) protein (258aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Phosphate import ATP-binding protein PstB n=12 Tax=Enterobacteriaceae RepID=C1ME42_9ENTR
phosphate ABC transporter ATP-binding protein
L2_059_000G1_scaffold_7005_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9135..10025)
DNA (891bp) protein (297aa)
Phosphate abc permease protein n=6 Tax=Citrobacter RepID=J1FY85_9ENTR
Phosphate transport system permease pstA {ECO:0000313|EMBL:ETX67654.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
pstA; phosphate transporter permease subunit PtsA
L2_059_000G1_scaffold_7005_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10025..10984)
DNA (960bp) protein (320aa)
Phosphate transport system permease pstC n=6 Tax=Citrobacter RepID=J0LU51_9ENTR
Phosphate transport system permease pstC {ECO:0000313|EMBL:ETX67655.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
pstC; phosphate transporter permease subunit PstC
L2_059_000G1_scaffold_7005_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11158..11958)
DNA (801bp) protein (267aa)
Phosphate-binding protein PstS n=6 Tax=Citrobacter RepID=J1FY20_9ENTR
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
phosphate ABC transporter periplasmic substrate-binding protein PstS
L2_059_000G1_scaffold_7005_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12293..13294)
DNA (1002bp) protein (334aa)
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=2 Tax=Citrobacter RepID=R8V1D0_9ENTR
L2_059_000G1_scaffold_7005_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13305..13907)
DNA (603bp) protein (201aa)
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000313|EMBL:CDL40711.1}; EC=2.6.1.16 {ECO:0000313|EMBL:CDL40711.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QY81_CITFR
L2_059_000G1_scaffold_7005_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14132..14965)
DNA (834bp) protein (278aa)
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase (EC:2.3.1.157 2.7.7.23)
Bifunctional protein GlmU n=3 Tax=Citrobacter RepID=J0VLP6_9ENTR
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
L2_059_000G1_scaffold_7005_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14983..15294)
DNA (312bp) protein (104aa)
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase (EC:2.3.1.157 2.7.7.23)
Bifunctional protein GlmU n=1 Tax=Citrobacter sp. KTE30 RepID=R8UN83_9ENTR
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
L2_059_000G1_scaffold_7005_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15944..16270)
DNA (327bp) protein (109aa)
atpC; ATP synthase F0F1 subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=13 Tax=Enterobacteriaceae RepID=ATPE_ENT38
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Displaying 19 items

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