ggKbase home page

L2_059_000G1_scaffold_4898

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_4898_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..181
DNA (180bp) protein (60aa)
Rubrerythrin family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPA0_CLOPF
hypothetical protein
Rubrerythrin family protein {ECO:0000313|EMBL:ABG86631.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_059_000G1_scaffold_4898_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(331..1677)
DNA (1347bp) protein (449aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Phosphoglucosamine mutase n=8 Tax=Clostridium perfringens RepID=GLMM_CLOP1
L2_059_000G1_scaffold_4898_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2150..3442
DNA (1293bp) protein (431aa)
Conserved domain protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RP98_CLOPF
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EDT27435.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_000G1_scaffold_4898_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3704..5125)
DNA (1422bp) protein (474aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Sensor histidine kinase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V436_CLOPF
two-component sensor histidine kinase
L2_059_000G1_scaffold_4898_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5088..5780)
DNA (693bp) protein (231aa)
Two-component response regulator n=6 Tax=Clostridium perfringens RepID=Q8XHZ2_CLOPE
two-component response regulator
Response regulator {ECO:0000313|EMBL:EDT15937.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_059_000G1_scaffold_4898_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5950..6267)
DNA (318bp) protein (106aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q0SQL3_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86209.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_059_000G1_scaffold_4898_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6333..6632)
DNA (300bp) protein (100aa)
TrpR-like protein YerC/YecD n=10 Tax=Clostridium perfringens RepID=H7CZ40_CLOPF
TrpR-like protein YerC/YecD
TrpR homolog YerC/YecD {ECO:0000313|EMBL:EDT27475.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_000G1_scaffold_4898_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6772..7611)
DNA (840bp) protein (280aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XHY9_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27480.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_059_000G1_scaffold_4898_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7728..9746)
DNA (2019bp) protein (673aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CV11_CLOPF
Putative glycogen debranching enzyme, type {ECO:0000313|EMBL:EIA16108.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
glycogen debranching enzyme, type
L2_059_000G1_scaffold_4898_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10216..12294)
DNA (2079bp) protein (693aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
phosphorylase 2 (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SQL0_CLOPS
L2_059_000G1_scaffold_4898_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12287..13780)
DNA (1494bp) protein (498aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
4-alpha-glucanotransferase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHY6_CLOPE
malQ; 4-alpha-glucanotransferase
L2_059_000G1_scaffold_4898_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13802..15949)
DNA (2148bp) protein (716aa)
Glucosyl hydrolase family protein n=2 Tax=Clostridium perfringens RepID=H7CZ45_CLOPF
Glucosyl hydrolase family protein {ECO:0000313|EMBL:EIA16111.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
glycosyl hydrolase
L2_059_000G1_scaffold_4898_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15973..16974)
DNA (1002bp) protein (334aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF62_CLOPF
malR; LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDT27486.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Displaying 13 items

View Taxonomy