ggKbase home page

L2_059_000G1_scaffold_1350

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_1350_1
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..75)
DNA (75bp) protein (25aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YJ61_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ77132.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_000G1_scaffold_1350_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(223..591)
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YJ60_ALIFI
Uncharacterized protein {ECO:0000313|EMBL:CDD25627.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_059_000G1_scaffold_1350_3
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

799..1329
DNA (531bp) protein (177aa)
Transcriptional regulator n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UFT5_9BACT
Transcriptional regulator {ECO:0000313|EMBL:CCZ77133.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_000G1_scaffold_1350_4
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1709..2239)
DNA (531bp) protein (177aa)
OmpA-like transmembrane domain protein n=2 Tax=Alistipes RepID=E4MFD7_9BACT
OmpA-like transmembrane domain protein {ECO:0000313|EMBL:CCZ77134.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
OmpA-like transmembrane domain-containing protein
L2_059_000G1_scaffold_1350_5
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2489..3862)
DNA (1374bp) protein (458aa)
Transporter, major facilitator family protein n=2 Tax=Alistipes RepID=E4MFD6_9BACT
Transporter major facilitator family protein {ECO:0000313|EMBL:CCZ77135.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
sugar phosphate permease
L2_059_000G1_scaffold_1350_6
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3899..4783)
DNA (885bp) protein (295aa)
Metal-dependent hydrolase n=3 Tax=Alistipes RepID=I3YJ56_ALIFI
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:CCZ77136.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_000G1_scaffold_1350_7
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4793..5398)
DNA (606bp) protein (202aa)
Glycerophosphoryl diester phosphodiesterase n=2 Tax=Alistipes RepID=I3YJ55_ALIFI
glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:AFL77023.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_059_000G1_scaffold_1350_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5580..7577)
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MFD3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR56358.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
metal-dependent hydrolase
L2_059_000G1_scaffold_1350_9
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7676..9529)
DNA (1854bp) protein (618aa)
PDK repeat-containing protein n=2 Tax=Alistipes RepID=I3YJ53_ALIFI
PDK repeat-containing protein
PDK repeat-containing protein {ECO:0000313|EMBL:CCZ77139.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_000G1_scaffold_1350_10
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9558..10979)
DNA (1422bp) protein (474aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UGK4_9BACT
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CCZ77140.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
glycerophosphoryl diester phosphodiesterase
L2_059_000G1_scaffold_1350_11
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10992..12221)
DNA (1230bp) protein (410aa)
RagB/SusD family protein n=3 Tax=Alistipes RepID=I3YJ51_ALIFI
RagB/SusD family protein
RagB/SusD family protein {ECO:0000313|EMBL:CCZ77141.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_000G1_scaffold_1350_12
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12235..13980)
DNA (1746bp) protein (582aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Alistipes RepID=I3YJ50_ALIFI
SusC/RagA family TonB-linked outer membrane protein
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AFL77018.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_059_000G1_scaffold_1350_13
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14011..15795)
DNA (1785bp) protein (595aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UFU3_9BACT
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CCZ77143.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
SusC/RagA family TonB-linked outer membrane protein
L2_059_000G1_scaffold_1350_14
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15902..16885)
DNA (984bp) protein (328aa)
Fe2+-dicitrate sensor membrane component n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UN47_9BACT
Fe2+-dicitrate sensor membrane component {ECO:0000313|EMBL:CCZ77144.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Fe2+-dicitrate sensor membrane protein
L2_059_000G1_scaffold_1350_15
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17028..17582)
DNA (555bp) protein (185aa)
RNA polymerase sigma-70 factor Bacteroides expansion family 1 n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UGK9_9BACT
RNA polymerase sigma-70 factor Bacteroides expansion family 1 {ECO:0000313|EMBL:CCZ77145.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
RNA polymerase sigma-70 factor
L2_059_000G1_scaffold_1350_16
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18120..19202
DNA (1083bp) protein (361aa)
RND family efflux transporter, MFP subunit n=3 Tax=Alistipes RepID=I3YJ47_ALIFI
RND family efflux transporter MFP subunit
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:CCZ77146.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_000G1_scaffold_1350_17
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19215..22256
DNA (3042bp) protein (1014aa)
Cation/multidrug efflux pump n=3 Tax=Alistipes RepID=I3YJ46_ALIFI
cation/multidrug efflux pump
RND transporter, HAE1 family {ECO:0000313|EMBL:EFR56343.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L2_059_000G1_scaffold_1350_18
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22253..23575
DNA (1323bp) protein (441aa)
Outer membrane protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ45_ALIFI
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AFL77013.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_059_000G1_scaffold_1350_19
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23692..23964)
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YJ44_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ77150.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_000G1_scaffold_1350_20
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24533..26926
DNA (2394bp) protein (798aa)
Outer membrane cobalamin receptor protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5V185_9BACT
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:CCZ77151.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
outer membrane cobalamin receptor protein
L2_059_000G1_scaffold_1350_21
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27222..28115)
DNA (894bp) protein (298aa)
Metal-dependent hydrolase n=3 Tax=Alistipes RepID=I3YJ41_ALIFI
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EFR57474.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
metal-dependent hydrolase
L2_059_000G1_scaffold_1350_22
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28126..29034)
DNA (909bp) protein (303aa)
Metal-dependent hydrolase n=3 Tax=Alistipes RepID=I3YJ40_ALIFI
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:CCZ77153.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_000G1_scaffold_1350_23
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29065..31380)
DNA (2316bp) protein (772aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YJ39_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ77154.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_000G1_scaffold_1350_24
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31400..33838)
DNA (2439bp) protein (813aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ38_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77006.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_059_000G1_scaffold_1350_25
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33849..35345)
DNA (1497bp) protein (499aa)
RagB/SusD family protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ37_ALIFI
RagB/SusD family protein
RagB/SusD family protein {ECO:0000313|EMBL:AFL77005.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_059_000G1_scaffold_1350_26
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35364..38762)
DNA (3399bp) protein (1133aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Alistipes sp. HGB5 RepID=E4MBV5_9BACT
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EFR57494.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
SusC/RagA family TonB-linked outer membrane protein
L2_059_000G1_scaffold_1350_27
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38919..39446)
DNA (528bp) protein (176aa)
Sigma factor regulatory protein FecR/PupR family n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UN56_9BACT
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CCZ77159.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Fe2+-dicitrate sensor membrane protein
L2_059_000G1_scaffold_1350_28
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39482..39721)
DNA (240bp) protein (80aa)
Fe2+-dicitrate sensor, membrane component n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ35_ALIFI
Fe2+-dicitrate sensor membrane protein
Fe2+-dicitrate sensor, membrane component {ECO:0000313|EMBL:AFL77003.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_059_000G1_scaffold_1350_29
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39854..40411)
DNA (558bp) protein (186aa)
RNA polymerase sigma-70 factor, Bacteroides expansion family 1 n=3 Tax=Alistipes RepID=I3YJ34_ALIFI
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor Bacteroides expansion family 1 {ECO:0000313|EMBL:CCZ77033.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_000G1_scaffold_1350_30
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40649..42115)
DNA (1467bp) protein (489aa)
Amino acid transporter n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ33_ALIFI
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AFL77001.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Displaying items 1-30 of 59 in total

View Taxonomy