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L2_059_000G1_scaffold_1732

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_1732_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..647
DNA (645bp) protein (215aa)
Maltose transporter permease n=6 Tax=Citrobacter RepID=J0LZ62_9ENTR
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEL78298.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
malG; maltose transporter permease
L2_059_000G1_scaffold_1732_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

950..2128
DNA (1179bp) protein (393aa)
C-S lyase family protein {ECO:0000313|EMBL:KEL78299.1}; EC=4.4.-.- {ECO:0000313|EMBL:KEL78299.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Aspartate aminotransferase n=2 Tax=Escherichia coli RepID=V6ED41_ECOLX
putative aminotransferase
L2_059_000G1_scaffold_1732_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2121..3572
DNA (1452bp) protein (484aa)
Na+/H+ antiporter NhaC n=2 Tax=Escherichia coli RepID=L2X6U8_ECOLX
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:KEL78300.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Na+/H+ antiporter
L2_059_000G1_scaffold_1732_4
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3648..4058)
DNA (411bp) protein (137aa)
Protein PsiE homolog n=12 Tax=Enterobacteriaceae RepID=C1MFG0_9ENTR
phosphate-starvation-inducible protein PsiE
Protein PsiE homolog {ECO:0000256|HAMAP-Rule:MF_01048}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
L2_059_000G1_scaffold_1732_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4197..4649
DNA (453bp) protein (151aa)
UDP-3-O-(3-hydroxymyristoyl)-glucosamine n-acyltransferase n=3 Tax=Citrobacter RepID=J1FWZ8_9ENTR
UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase {ECO:0000313|EMBL:ETX71704.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
L2_059_000G1_scaffold_1732_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4747..6843)
DNA (2097bp) protein (699aa)
Outer membrane lipoprotein n=3 Tax=Citrobacter RepID=J0VKF4_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC02483.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L2_059_000G1_scaffold_1732_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6843..7580)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8V5V5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC02484.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_000G1_scaffold_1732_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7577..8215)
DNA (639bp) protein (213aa)
Lipoprotein n=1 Tax=Citrobacter sp. KTE30 RepID=R8V6K5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC02485.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_000G1_scaffold_1732_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8335..8577)
DNA (243bp) protein (81aa)
Uncharacterized protein n=8 Tax=Citrobacter RepID=J0LSZ2_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY11411.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_059_000G1_scaffold_1732_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8957..10447)
DNA (1491bp) protein (497aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00031329}; EC=5.3.1.9 {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00031329};; Flags: Fragment;; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Glucose-6-phosphate isomerase n=7 Tax=Citrobacter RepID=J1FX02_9ENTR
L2_059_000G1_scaffold_1732_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10762..12111
DNA (1350bp) protein (450aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=4 Tax=Citrobacter RepID=J0VKF9_9ENTR
L2_059_000G1_scaffold_1732_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12154..12939)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QJI1_CITFR
Nucleotidyltransferase {ECO:0000313|EMBL:KJC02489.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
nucleotidyltransferase
L2_059_000G1_scaffold_1732_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12945..14072)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8V6J8_9ENTR
SPFH domain / Band 7 family protein {ECO:0000313|EMBL:KEL78310.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L2_059_000G1_scaffold_1732_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14522..16108
DNA (1587bp) protein (529aa)
Sigma 54-dependent transcriptional regulator for rtcBA expression n=1 Tax=Citrobacter sp. KTE30 RepID=R8V6M5_9ENTR
Sigma 54-dependent transcriptional regulator for rtcBA expression {ECO:0000313|EMBL:ETX71695.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulatory protein RtcR
L2_059_000G1_scaffold_1732_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16129..16467)
DNA (339bp) protein (113aa)
XRE family transcriptional regulator n=3 Tax=Citrobacter RepID=K8QT29_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX71694.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
putative conserved small protein
L2_059_000G1_scaffold_1732_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17008..17280
DNA (273bp) protein (91aa)
Uncharacterized protein n=5 Tax=Enterobacteriaceae RepID=I6G6E0_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:KJC06270.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_059_000G1_scaffold_1732_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17277..18152)
DNA (876bp) protein (292aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Pseudouridine synthase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWM4_CITFR
23S rRNA pseudouridylate synthase
L2_059_000G1_scaffold_1732_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18622..19575
DNA (954bp) protein (318aa)
Transcriptional regulator protein n=2 Tax=Citrobacter RepID=M3CJ04_CITFR
Putative transcriptional regulator of sorbose uptake and utilization genes {ECO:0000313|EMBL:CDL36651.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
transcriptional regulator with sigma factor-related N-terminal domain
L2_059_000G1_scaffold_1732_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19646..20452
DNA (807bp) protein (269aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=J0LT00_9ENTR
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KEL78316.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
L2_059_000G1_scaffold_1732_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20462..20869
DNA (408bp) protein (136aa)
PTS system, mannose/fructose/sorbose family, IIA component n=5 Tax=Citrobacter RepID=J1FX12_9ENTR
PTS system sorbose-specific IIA component {ECO:0000313|EMBL:ETX66144.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
PTS system L-sorbose-specific IIA component, Man family
L2_059_000G1_scaffold_1732_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20869..21363
DNA (495bp) protein (165aa)
PTS system protein n=5 Tax=Citrobacter RepID=J0VKG7_9ENTR
Sorbose-specific phosphotransferase enzyme IIB component {ECO:0000313|EMBL:ETX71687.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
PTS system L-sorbose-specific IIB component, Man family
L2_059_000G1_scaffold_1732_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21429..22226
DNA (798bp) protein (266aa)
PTS system mannose-specific transporter subunit IIC n=3 Tax=Citrobacter RepID=K8QWM8_CITFR
PTS mannose transporter subunit IIC {ECO:0000313|EMBL:KJC06264.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
PTS system L-sorbose-specific IIC component, Man family
L2_059_000G1_scaffold_1732_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22238..23062
DNA (825bp) protein (275aa)
PTS system, mannose/fructose/sorbose family, IID component n=7 Tax=Citrobacter RepID=C1MFE0_9ENTR
PTS system, mannose/fructose/sorbose , IID component family protein {ECO:0000313|EMBL:KEL78320.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
PTS system, mannose/fructose/sorbose family, IID component
L2_059_000G1_scaffold_1732_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23131..24354
DNA (1224bp) protein (408aa)
Putative L-sorbose 1-phosphate dehydrogenase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QT35_CITFR
Zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:KEL78321.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
theronine dehydrogenase-like Zn-dependent dehydrogenase
L2_059_000G1_scaffold_1732_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24356..25168
DNA (813bp) protein (271aa)
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:KEL78322.1}; EC=1.1.1.- {ECO:0000313|EMBL:KEL78322.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Shikimate 5-dehydrogenase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QM30_CITFR
shikimate 5-dehydrogenase
L2_059_000G1_scaffold_1732_26
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25202..25519)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BKW9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EFE05545.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
CcdB toxin protein
L2_059_000G1_scaffold_1732_27
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25519..25779)
DNA (261bp) protein (87aa)
CcdB antidote CcdA n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BJS2_CITFR
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein {ECO:0000313|EMBL:EFE05546.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
CcdA protein (antitoxin to CcdB)
L2_059_000G1_scaffold_1732_28
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25909..26274)
DNA (366bp) protein (122aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8QNJ4_CITFR
Uncharacterized protein {ECO:0000313|EMBL:EIQ64095.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
hypothetical protein
L2_059_000G1_scaffold_1732_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26406..26579
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TKA1_CITRI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEL78324.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L2_059_000G1_scaffold_1732_30
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26650..26811
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BKX2_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EFE05548.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
phage protein
Displaying items 1-30 of 37 in total

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