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L2_059_000G1_scaffold_2110

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_2110_1
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..300
DNA (300bp) protein (100aa)
ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside triphosphate reductase n=3 Tax=Salmonella enterica subsp. enterica serovar Choleraesuis RepID=E8NLF8_SALET
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:KDF08972.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
L2_059_000G1_scaffold_2110_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

485..949
DNA (465bp) protein (155aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BJA2_CITFR
anaerobic ribonucleotide reductase-activating protein
L2_059_000G1_scaffold_2110_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(953..1237)
DNA (285bp) protein (95aa)
Stability protein StbE n=2 Tax=Citrobacter freundii RepID=K8QQU9_CITFR
RelE toxin {ECO:0000313|EMBL:KJC07751.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
SBOV45451; conserved hypothetical protein
L2_059_000G1_scaffold_2110_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1227..1469)
DNA (243bp) protein (81aa)
Bifunctional antitoxin/transcriptional repressor RelB n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QX08_CITFR
Antitoxin RelB {ECO:0000313|EMBL:KEL78909.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
bifunctional antitoxin/transcriptional repressor RelB
L2_059_000G1_scaffold_2110_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1547..3460)
DNA (1914bp) protein (638aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QSC2_CITFR
Transcription antiterminator BglG {ECO:0000313|EMBL:KJC13689.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcription antiterminator BglG
L2_059_000G1_scaffold_2110_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3482..4222)
DNA (741bp) protein (247aa)
2-dehydro-3-deoxyphosphogluconate aldolase {ECO:0000313|EMBL:KEL78911.1}; EC=4.1.3.16 {ECO:0000313|EMBL:KEL78911.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
4-hydroxy-2-oxoglutarate aldolase n=6 Tax=Citrobacter RepID=J1G032_9ENTR
2-dehydro-3-deoxyphosphooctonate aldolase
L2_059_000G1_scaffold_2110_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4219..5337)
DNA (1119bp) protein (373aa)
Pyridoxal phosphate-dependent enzyme n=6 Tax=Citrobacter RepID=J0LW49_9ENTR
L-seryl-tRNA(Ser) seleniumtransferase {ECO:0000313|EMBL:ETX71926.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L-seryl-tRNA selenium transferase
L2_059_000G1_scaffold_2110_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5321..6454)
DNA (1134bp) protein (378aa)
dihydroorotase (EC:3.5.2.3)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8V2F8_9ENTR
Amidohydrolase family protein {ECO:0000313|EMBL:KEL78913.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L2_059_000G1_scaffold_2110_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6513..7157)
DNA (645bp) protein (215aa)
Uncharacterized protein n=8 Tax=Enterobacteriaceae RepID=C1MBY2_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX71924.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L2_059_000G1_scaffold_2110_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7169..7945)
DNA (777bp) protein (259aa)
Uncharacterized protein n=8 Tax=Citrobacter RepID=C1MBY1_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC13694.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L2_059_000G1_scaffold_2110_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7968..8267)
DNA (300bp) protein (100aa)
Uncharacterized protein n=7 Tax=Citrobacter RepID=C1MBY0_9ENTR
Cytoplasmic protein {ECO:0000313|EMBL:ETX71922.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
cytoplasmic protein
L2_059_000G1_scaffold_2110_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8270..8632)
DNA (363bp) protein (121aa)
EF_0830/AHA_3911 family protein n=11 Tax=Enterobacteriaceae RepID=D4BFT2_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETX65487.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
L2_059_000G1_scaffold_2110_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8643..8951)
DNA (309bp) protein (103aa)
PRD domain-containing protein n=7 Tax=Citrobacter RepID=C1MBX8_9ENTR
PRD domain protein {ECO:0000313|EMBL:KEL78918.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
glycine dehydrogenase
L2_059_000G1_scaffold_2110_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9284..9670)
DNA (387bp) protein (129aa)
Soluble cytochrome b562 n=7 Tax=Citrobacter RepID=C1MBX7_9ENTR
Soluble cytochrome b562 {ECO:0000313|EMBL:ETX65485.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
cytochrome b562
L2_059_000G1_scaffold_2110_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9717..11069)
DNA (1353bp) protein (451aa)
Protein pmbA n=6 Tax=Citrobacter RepID=G9SEY4_CITFR
Peptidase PmbA {ECO:0000313|EMBL:KJC13699.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
pmbA; peptidase PmbA
L2_059_000G1_scaffold_2110_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11165..11716
DNA (552bp) protein (184aa)
UPF0307 protein WYG_2991 n=5 Tax=Citrobacter RepID=J1G042_9ENTR
UPF0307 protein P834_04947 {ECO:0000256|HAMAP-Rule:MF_00765}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_059_000G1_scaffold_2110_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11824..13203)
DNA (1380bp) protein (460aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=2 Tax=Citrobacter RepID=K8QNM0_CITFR
L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:KEL78922.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
L2_059_000G1_scaffold_2110_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13379..14377
DNA (999bp) protein (333aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
fructose 1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 n=7 Tax=Enterobacteriaceae RepID=I6F4Z4_SHIFL
L2_059_000G1_scaffold_2110_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14492..15604)
DNA (1113bp) protein (371aa)
Methyl-accepting chemotaxis sensory transducer n=5 Tax=Citrobacter RepID=J0M2H6_9ENTR
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ETX71913.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
chemotaxis protein
L2_059_000G1_scaffold_2110_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15708..16709)
DNA (1002bp) protein (334aa)
Inner membrane ABC transporter permease YjfF n=6 Tax=Citrobacter RepID=J1G047_9ENTR
Inner membrane ABC transporter permease yjfF {ECO:0000313|EMBL:ETX71912.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
ABC transporter permease
L2_059_000G1_scaffold_2110_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16696..17718)
DNA (1023bp) protein (341aa)
ABC transporter n=6 Tax=Citrobacter RepID=K8R0M8_CITFR
Inner membrane ABC transporter permease ytfT {ECO:0000313|EMBL:ETX71911.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
sugar ABC transporter permease
L2_059_000G1_scaffold_2110_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17732..19234)
DNA (1503bp) protein (501aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8V1R6_9ENTR
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETX71910.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
sugar ABC transporter ATP-binding protein
L2_059_000G1_scaffold_2110_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19337..20293)
DNA (957bp) protein (319aa)
ABC transporter periplasmic-binding protein ytfQ n=6 Tax=Citrobacter RepID=G9SEZ2_CITFR
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC13705.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
sugar ABC transporter substrate-binding protein
L2_059_000G1_scaffold_2110_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20603..21130
DNA (528bp) protein (176aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=11 Tax=Citrobacter RepID=D4BFR9_9ENTR
L2_059_000G1_scaffold_2110_25
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21201..21482)
DNA (282bp) protein (94aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8QS83_CITFR
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AAQ59011.1}; TaxID=243365 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /; NBRC 12614 / NCIMB 9131 / NCTC 9757).;"
L2_059_000G1_scaffold_2110_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21483..21593)
DNA (111bp) protein (37aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli H736 RepID=F4SMI7_ECOLX
Putative uncharacterized protein {ECO:0000313|EMBL:EGI10537.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
hypothetical protein
Displaying 26 items

View Taxonomy