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L2_059_000G1_scaffold_2351

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_2351_1
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1..1425)
DNA (1425bp) protein (475aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
Pseudouridine synthase n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UMD6_AKKM8
pseudouridine synthase
L2_059_000G1_scaffold_2351_2
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1626..1781)
DNA (156bp) protein (52aa)
Uncharacterized protein n=3 Tax=Akkermansia RepID=B2UMD7_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD97718.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L2_059_000G1_scaffold_2351_3
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1905..2624)
DNA (720bp) protein (240aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E4B5_9BACT
L2_059_000G1_scaffold_2351_4
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2637..3773)
DNA (1137bp) protein (379aa)
Peptide chain release factor 2 n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E4Q5_9BACT
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
peptide chain release factor 2
L2_059_000G1_scaffold_2351_5
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4100..4501)
DNA (402bp) protein (134aa)
Transcriptional regulator, MarR family n=2 Tax=Akkermansia RepID=B2UME0_AKKM8
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACD04089.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L2_059_000G1_scaffold_2351_6
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4638..6326)
DNA (1689bp) protein (563aa)
30S ribosomal protein S1 n=2 Tax=Akkermansia RepID=B2UME1_AKKM8
30S ribosomal protein S1
Ribosomal protein S1 {ECO:0000313|EMBL:ACD04090.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L2_059_000G1_scaffold_2351_7
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6636..7226
DNA (591bp) protein (197aa)
Nitroreductase n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UME2_AKKM8
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ACD04091.1}; Flags: Precursor;; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L2_059_000G1_scaffold_2351_8
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7529..8011)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E8D3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97757.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L2_059_000G1_scaffold_2351_9
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(8591..9124)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2ULD8_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD03927.1}; Flags: Precursor;; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L2_059_000G1_scaffold_2351_10
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9124..10761)
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6JAR3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDB55759.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
hypothetical protein
L2_059_000G1_scaffold_2351_11
unknown

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comp(10862..10954)
DNA (93bp) protein (31aa)

This feature has no annotations

L2_059_000G1_scaffold_2351_12
unknown

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comp(11704..11814)
DNA (111bp) protein (37aa)

This feature has no annotations

L2_059_000G1_scaffold_2351_13
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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11829..12677
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JUI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS37805.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
glycosyl transferase
L2_059_000G1_scaffold_2351_14
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

12895..13740
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E4X8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97760.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L2_059_000G1_scaffold_2351_15
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13754..14623)
DNA (870bp) protein (290aa)
Peptidase M23 n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E691_9BACT
Peptidase M23 {ECO:0000313|EMBL:CDD97763.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
peptidase M23
L2_059_000G1_scaffold_2351_16
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14671..15606)
DNA (936bp) protein (312aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E4Y3_9BACT
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:CDD97765.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Xylose isomerase domain-containing protein TIM barrel
L2_059_000G1_scaffold_2351_17
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(15622..16410)
DNA (789bp) protein (263aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E694_9BACT
L2_059_000G1_scaffold_2351_18
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(16431..16940)
DNA (510bp) protein (170aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E4Y7_9BACT
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:CDD97770.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
L2_059_000G1_scaffold_2351_19
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(16996..17736)
DNA (741bp) protein (247aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=Akkermansia RepID=DAPB_AKKM8
L2_059_000G1_scaffold_2351_20
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(17749..18648)
DNA (900bp) protein (300aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E4Z1_9BACT
L2_059_000G1_scaffold_2351_21
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(18704..19417)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E4I6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD97779.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L2_059_000G1_scaffold_2351_22
unknown

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19577..19702
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 22 items

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