ggKbase home page

L2_059_000G1_scaffold_3070

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_3070_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(316..1533)
DNA (1218bp) protein (406aa)
Tetratricopeptide repeat protein n=2 Tax=Bacteroides vulgatus RepID=D4VAY5_BACVU
hypothetical protein
TPR repeat family protein {ECO:0000313|EMBL:KDS31179.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_059_000G1_scaffold_3070_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(1564..4131)
DNA (2568bp) protein (856aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
DNA gyrase subunit A n=3 Tax=Bacteroides vulgatus RepID=A6L5G3_BACV8
DNA gyrase A subunit
L2_059_000G1_scaffold_3070_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4496..7012
DNA (2517bp) protein (839aa)
Negative regulator of genetic competence n=2 Tax=Bacteroides vulgatus RepID=A6L5G4_BACV8
IstB-like ATP binding family protein {ECO:0000313|EMBL:KDS31181.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
negative regulator of genetic competence
L2_059_000G1_scaffold_3070_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7147..9192
DNA (2046bp) protein (682aa)
Hsp90 protein n=2 Tax=Bacteroides vulgatus RepID=D4VAY8_BACVU
Chaperone htpG {ECO:0000313|EMBL:EIY75359.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
heat shock protein 90
L2_059_000G1_scaffold_3070_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9208..10680
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZIL4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY75360.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
patatin-like phospholipase
L2_059_000G1_scaffold_3070_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10697..11443
DNA (747bp) protein (249aa)
Phospholipase, patatin family n=3 Tax=root RepID=C6Z2K4_9BACE
Patatin-like phospholipase family protein {ECO:0000313|EMBL:KDS53615.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
patatin-like phospholipase
L2_059_000G1_scaffold_3070_7
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12153..13022)
DNA (870bp) protein (290aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
4-hydroxy-tetrahydrodipicolinate synthase n=8 Tax=root RepID=DAPA_BACV8
dihydrodipicolinate synthase
L2_059_000G1_scaffold_3070_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13148..15145)
DNA (1998bp) protein (666aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
DNA ligase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V7F1_BACVU
DNA ligase
L2_059_000G1_scaffold_3070_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15244..15918
DNA (675bp) protein (225aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V7F2_BACVU
L2_059_000G1_scaffold_3070_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16284..17195)
DNA (912bp) protein (304aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Dihydroorotate dehydrogenase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V7F3_BACVU
dihydroorotate dehydrogenase 1B
L2_059_000G1_scaffold_3070_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17183..17962)
DNA (780bp) protein (260aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=7 Tax=Bacteroides RepID=A6L5H2_BACV8
dihydroorotate dehydrogenase, electron transfer subunit
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_059_000G1_scaffold_3070_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18056..18469)
DNA (414bp) protein (138aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L5H3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY74787.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_059_000G1_scaffold_3070_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19423..20439)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L5H4_BACV8
hypothetical protein
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EOS01759.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_059_000G1_scaffold_3070_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20451..21227)
DNA (777bp) protein (259aa)
AMP nucleosidase (EC:3.2.2.4)
AMP nucleosidase n=7 Tax=Bacteroides RepID=A6L5H5_BACV8
AMP nucleosidase {ECO:0000313|EMBL:EOS01758.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_059_000G1_scaffold_3070_15
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21285..21734
DNA (450bp) protein (150aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=A6L5H6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EET15104.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_059_000G1_scaffold_3070_16
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21835..22626)
DNA (792bp) protein (264aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=A6L5H7_BACV8
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEB24851.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L2_059_000G1_scaffold_3070_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22635..23729)
DNA (1095bp) protein (365aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Putative GTP cyclohydrolase 1 type 2 n=3 Tax=Bacteroides vulgatus RepID=A6L5H8_BACV8
hypothetical protein
L2_059_000G1_scaffold_3070_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23791..24069)
DNA (279bp) protein (93aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=A6L5H9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS01754.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_059_000G1_scaffold_3070_19
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24128..24874)
DNA (747bp) protein (249aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6Z2J1_9BACE
ABC transporter membrane protein
Putative ABC transport system membrane protein {ECO:0000313|EMBL:CDF17847.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L2_059_000G1_scaffold_3070_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24907..25383)
DNA (477bp) protein (159aa)
ABC transporter, ATP-binding protein n=2 Tax=Bacteroides vulgatus RepID=D4V7G3_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY74796.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
ABC transporter ATP-binding protein
L2_059_000G1_scaffold_3070_21
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(25418..26908)
DNA (1491bp) protein (497aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Proline--tRNA ligase n=7 Tax=Bacteroides RepID=SYP_BACV8
L2_059_000G1_scaffold_3070_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27023..28174)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L5I3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR40947.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_059_000G1_scaffold_3070_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28178..30205)
DNA (2028bp) protein (676aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Glycoside hydrolase family 13, candidate 1,4-alpha-glucan branching enzyme n=6 Tax=Bacteroides RepID=A6L5I4_BACV8
1,4-alpha-glucan branching protein
L2_059_000G1_scaffold_3070_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30234..30674)
DNA (441bp) protein (147aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L5I5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS47796.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_059_000G1_scaffold_3070_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30711..31376)
DNA (666bp) protein (222aa)
TIGR02453 family protein n=6 Tax=Bacteroides RepID=C6Z2I5_9BACE
TIGR02453 family domain protein {ECO:0000313|EMBL:KDS47795.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L2_059_000G1_scaffold_3070_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31452..32240)
DNA (789bp) protein (263aa)
Inositol-1-monophosphatase n=7 Tax=Bacteroides RepID=A6L5I7_BACV8
inositol-1-monophosphatase
Uncharacterized protein {ECO:0000313|EMBL:EIY74802.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_059_000G1_scaffold_3070_27
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32248..33366)
DNA (1119bp) protein (373aa)
MORN repeat protein n=2 Tax=Bacteroides RepID=C6Z2I3_9BACE
MORN repeat protein {ECO:0000313|EMBL:EET15092.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
phosphatidylinositol-4-phosphate 5-kinase
L2_059_000G1_scaffold_3070_28
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33438..34724)
DNA (1287bp) protein (429aa)
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EET15091.1}; EC=3.4.24.- {ECO:0000313|EMBL:EET15091.1};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Peptidase M16 inactive domain protein n=2 Tax=Bacteroides RepID=C6Z2I2_9BACE
zinc protease
L2_059_000G1_scaffold_3070_29
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34725..35483)
DNA (759bp) protein (253aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
3-deoxy-manno-octulosonate cytidylyltransferase n=7 Tax=Bacteroides RepID=KDSB_BACV8
L2_059_000G1_scaffold_3070_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35562..35936
DNA (375bp) protein (125aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=7 Tax=Bacteroides RepID=A6L5J1_BACV8
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:EIY74806.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Displaying items 1-30 of 61 in total

View Taxonomy