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L2_059_000G1_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_42_1
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..555)
DNA (555bp) protein (185aa)
PF01594 domain protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ABF6_9CLOT
PF01594 domain protein {ECO:0000313|EMBL:CCX38402.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L2_059_000G1_scaffold_42_2
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(579..1544)
DNA (966bp) protein (322aa)
Oxidoreductase domain protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YEC6_9FIRM
Oxidoreductase domain protein {ECO:0000313|EMBL:CDD29649.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
oxidoreductase domain-containing protein
L2_059_000G1_scaffold_42_3
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(1567..1938)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y6E0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD29455.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
Zn-finger containing protein
L2_059_000G1_scaffold_42_4
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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2405..3652
DNA (1248bp) protein (416aa)
Nucleotidyltransferase/DNA polymerase involved in DNA repair (EC:2.7.7.7)
DNA polymerase IV id=4206713 bin=GWF2_Clostridiales_36_10 species=Anaerofustis stercorihominis genus=Anaerofustis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
L2_059_000G1_scaffold_42_5
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3664..4968
DNA (1305bp) protein (435aa)
Putative DNA modification/repair radical SAM protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A951_9CLOT
Putative DNA modification/repair radical SAM protein {ECO:0000313|EMBL:CCX38409.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
radical SAM protein
L2_059_000G1_scaffold_42_6
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4947..5705
DNA (759bp) protein (253aa)
Uncharacterized protein n=5 Tax=Pelosinus fermentans RepID=I8S0L3_9FIRM
DNA metabolism protein, putative {ECO:0000313|EMBL:EIW15542.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
hypothetical protein
L2_059_000G1_scaffold_42_7
unknown

Not on your lists

5873..6064
DNA (192bp) protein (64aa)

This feature has no annotations

L2_059_000G1_scaffold_42_8
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6135..7841)
DNA (1707bp) protein (569aa)
Monogalactosyldiacylglycerol synthase C-terminal domain protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A5P6_9CLOT
Monogalactosyldiacylglycerol synthase C-terminal domain protein {ECO:0000313|EMBL:CCX38435.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
UDP-glucuronosyltransferase
L2_059_000G1_scaffold_42_9
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

8101..9687
DNA (1587bp) protein (529aa)
VanW-like protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YAN6_9FIRM
VanW-like protein {ECO:0000313|EMBL:CDD30980.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
Uncharacterized vancomycin resistance protein
L2_059_000G1_scaffold_42_10
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9762..11666
DNA (1905bp) protein (635aa)
NAD+ synthetase (EC:6.3.5.1)
Putative NAD+ synthetase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6A8_9CLOT
Putative NAD+ synthetase {ECO:0000313|EMBL:CCX38438.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L2_059_000G1_scaffold_42_11
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11867..12817
DNA (951bp) protein (317aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A989_9CLOT
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:CCX38439.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Phosphoglycerate dehydrogenase and related dehydrogenases
L2_059_000G1_scaffold_42_12
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12834..13973
DNA (1140bp) protein (380aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A5Q0_9CLOT
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes {ECO:0000313|EMBL:CCX38440.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L2_059_000G1_scaffold_42_13
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14026..15192
DNA (1167bp) protein (389aa)
tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
tRNA sulfurtransferase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AGG4_9CLOT
thiazole biosynthesis/tRNA modification protein ThiI
L2_059_000G1_scaffold_42_14
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15216..16469
DNA (1254bp) protein (418aa)
Putative competence-damage inducible protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6B4_9CLOT
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
competence/damage-inducible protein CinA
L2_059_000G1_scaffold_42_15
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16504..17535
DNA (1032bp) protein (344aa)
Sortase SrtB family n=1 Tax=Clostridium sp. CAG:557 RepID=R6GPG5_9CLOT
Sortase SrtB family {ECO:0000313|EMBL:CDB23569.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:557.;"
sortase, SrtB family
L2_059_000G1_scaffold_42_16
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17660..18322)
DNA (663bp) protein (221aa)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AGG8_9CLOT
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E {ECO:0000313|EMBL:CCX38446.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
HAD-superfamily hydrolase
L2_059_000G1_scaffold_42_17
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

18643..19221
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YR11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30991.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L2_059_000G1_scaffold_42_18
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19524..20933
DNA (1410bp) protein (470aa)
Trypsin n=1 Tax=Clostridium sp. MSTE9 RepID=J0N443_9CLOT
Trypsin {ECO:0000313|EMBL:EJF41589.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
peptidase S1 and S6 chymotrypsin/Hap
L2_059_000G1_scaffold_42_19
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(21217..22308)
DNA (1092bp) protein (364aa)
MdsC protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y6Z8_9FIRM
MdsC protein {ECO:0000313|EMBL:CDD29650.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
aminoglycoside phosphotransferase
L2_059_000G1_scaffold_42_20
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(22353..23639)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YM36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD29651.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L2_059_000G1_scaffold_42_21
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23904..24227
DNA (324bp) protein (108aa)
Transcriptional regulator PadR family n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5J8_9CLOT
Transcriptional regulator PadR family {ECO:0000313|EMBL:CDD73409.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
transcriptional regulator, PadR-like family
L2_059_000G1_scaffold_42_22
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24278..24964
DNA (687bp) protein (229aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C618_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDD73410.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_059_000G1_scaffold_42_23
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

24984..25970
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YP70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30396.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L2_059_000G1_scaffold_42_24
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26035..26514)
DNA (480bp) protein (160aa)
Predicted flavin-nucleotide-binding protein n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LBF7_RUMC1
Predicted flavin-nucleotide-binding protein
Predicted flavin-nucleotide-binding protein {ECO:0000313|EMBL:CBL16952.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L2_059_000G1_scaffold_42_25
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26694..27602
DNA (909bp) protein (303aa)
Haloacid dehalogenase hydrolase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AHC1_9CLOT
Haloacid dehalogenase hydrolase {ECO:0000313|EMBL:CCX38756.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
cof family hydrolase
L2_059_000G1_scaffold_42_26
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27712..28494
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BC66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61783.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
type I phosphodiesterase/nucleotide pyrophosphatase
L2_059_000G1_scaffold_42_27
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28582..29094
DNA (513bp) protein (171aa)
N-acetyltransferase GCN5 n=1 Tax=Blautia producta RepID=UPI000380245F
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADL04351.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_059_000G1_scaffold_42_28
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29169..30758
DNA (1590bp) protein (530aa)
heme ABC transporter ATP-binding protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036B1524
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJF38236.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L2_059_000G1_scaffold_42_29
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30875..31462
DNA (588bp) protein (196aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LWW8_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS62811.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
ECF subfamily RNA polymerase sigma-70 factor
L2_059_000G1_scaffold_42_30
unknown

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31459..32217
DNA (759bp) protein (253aa)

This feature has no annotations

Displaying items 1-30 of 169 in total

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