ggKbase home page

L2_059_000G1_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 170 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_68_1
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..545
DNA (543bp) protein (181aa)
polyprenyl diphosphate synthase (EC:2.5.1.-)
Polyprenyl diphosphate synthase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UJ96_9FIRM
Polyprenyl diphosphate synthase {ECO:0000313|EMBL:CDC70877.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
L2_059_000G1_scaffold_68_2
unknown

Not on your lists

912..1388
DNA (477bp) protein (159aa)

This feature has no annotations

L2_059_000G1_scaffold_68_3
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1385..1948
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QEX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK54966.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_059_000G1_scaffold_68_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1965..3815
DNA (1851bp) protein (617aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Oscillibacter RepID=U2RWH7_9FIRM
L2_059_000G1_scaffold_68_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3812..4636
DNA (825bp) protein (275aa)
Ribosomal RNA large subunit methyltransferase J n=2 Tax=Oscillibacter RepID=U2RN59_9FIRM
Ribosomal RNA large subunit methyltransferase J {ECO:0000313|EMBL:ERK54968.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative hemolysin
L2_059_000G1_scaffold_68_6
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4633..5511
DNA (879bp) protein (293aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=2 Tax=Oscillibacter RepID=U2QFN5_9FIRM
L2_059_000G1_scaffold_68_7
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5501..5950
DNA (450bp) protein (150aa)
Arginine repressor n=2 Tax=Oscillibacter RepID=U2PWV9_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
argR; arginine repressor
L2_059_000G1_scaffold_68_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6039..7172
DNA (1134bp) protein (378aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=2 Tax=Oscillibacter RepID=U2QEY1_9FIRM
L2_059_000G1_scaffold_68_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7247..7636
DNA (390bp) protein (130aa)
Preprotein translocase, YajC subunit n=2 Tax=Oscillibacter RepID=U2RWI2_9FIRM
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:ERK54972.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_059_000G1_scaffold_68_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7702..8124
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2RN63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK54973.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_059_000G1_scaffold_68_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8488..9123
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QET6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK54936.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_059_000G1_scaffold_68_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9152..10039
DNA (888bp) protein (296aa)
Tyrosine recombinase XerC n=2 Tax=Oscillibacter RepID=U2Q0A3_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
xerD; tyrosine recombinase XerD
L2_059_000G1_scaffold_68_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10332..10805
DNA (474bp) protein (158aa)
Sigma-70, region 4 n=2 Tax=Oscillibacter RepID=U2QFJ4_9FIRM
Sigma-70, region 4 {ECO:0000313|EMBL:ERK54939.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
RNA polymerase ECF subfamily sigma factor
L2_059_000G1_scaffold_68_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10802..12181
DNA (1380bp) protein (460aa)
Uncharacterized protein (Fragment) n=1 Tax=Oscillibacter sp. KLE 1728 RepID=U2RXW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58073.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_059_000G1_scaffold_68_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12371..12883
DNA (513bp) protein (171aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Oscillibacter RepID=U2QPE8_9FIRM
L2_059_000G1_scaffold_68_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12951..13556
DNA (606bp) protein (202aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ruvA; Holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvA n=2 Tax=Oscillibacter RepID=U2Q5N6_9FIRM
L2_059_000G1_scaffold_68_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13532..13786
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QGV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58076.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_059_000G1_scaffold_68_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13840..14904
DNA (1065bp) protein (355aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ruvB; Holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=Oscillibacter RepID=U2PY24_9FIRM
L2_059_000G1_scaffold_68_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14918..15397
DNA (480bp) protein (160aa)
Uncharacterized protein n=3 Tax=Oscillibacter RepID=U2RWZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58078.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_059_000G1_scaffold_68_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15402..15608)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QGS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58079.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_059_000G1_scaffold_68_21
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15696..15908
DNA (213bp) protein (71aa)
DNA-binding helix-turn-helix protein n=2 Tax=Oscillibacter RepID=U2PXZ0_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK58080.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
xre; transcriptional regulator
L2_059_000G1_scaffold_68_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16068..16280
DNA (213bp) protein (71aa)
DNA-binding helix-turn-helix protein (Fragment) n=1 Tax=Oscillibacter sp. KLE 1728 RepID=U2QG34_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK58080.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
helix-turn-helix domain-containing protein
L2_059_000G1_scaffold_68_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16430..16642
DNA (213bp) protein (71aa)
DNA-binding helix-turn-helix protein n=2 Tax=Oscillibacter RepID=U2QNK3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK58081.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
helix-turn-helix domain-containing protein
L2_059_000G1_scaffold_68_24
unknown

Not on your lists

comp(16694..17320)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. KLE 1728 RepID=U2QGK9_9FIRM
L2_059_000G1_scaffold_68_25
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17380..18735
DNA (1356bp) protein (452aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=2 Tax=Oscillibacter RepID=U2QGI4_9FIRM
L2_059_000G1_scaffold_68_26
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18803..19444
DNA (642bp) protein (214aa)
Putative RNA polymerase sigma-H factor n=2 Tax=Oscillibacter RepID=U2PXR0_9FIRM
Putative RNA polymerase sigma-H factor {ECO:0000313|EMBL:ERK58083.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative RNA polymerase sigma factor
L2_059_000G1_scaffold_68_27
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19483..19764
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QFV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58084.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_059_000G1_scaffold_68_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20009..20218
DNA (210bp) protein (70aa)
Hydrid cluster protein-associated redox disulfide domain protein n=2 Tax=Oscillibacter RepID=U2Q5P6_9FIRM
Hydrid cluster protein-associated redox disulfide domain protein {ECO:0000313|EMBL:ERK58085.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_059_000G1_scaffold_68_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20284..21000
DNA (717bp) protein (239aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QNK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58086.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_059_000G1_scaffold_68_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20978..21769
DNA (792bp) protein (264aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Putative GTP cyclohydrolase 1 type 2 n=2 Tax=Oscillibacter RepID=U2QGI6_9FIRM
hypothetical protein
Displaying items 1-30 of 170 in total

View Taxonomy