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L2_059_000G1_scaffold_125

Search features with annotation key words

Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_125_1
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..654
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30338.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_059_000G1_scaffold_125_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

674..1954
DNA (1281bp) protein (427aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=2 Tax=Clostridiales RepID=B0NAY7_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30337.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_059_000G1_scaffold_125_3
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2006..2704
DNA (699bp) protein (233aa)
Clp protease n=2 Tax=Clostridiales RepID=F7KQK1_9FIRM
Clp protease {ECO:0000313|EMBL:EGN30336.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Protease subunit of ATP-dependent Clp proteases
L2_059_000G1_scaffold_125_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2768..5158
DNA (2391bp) protein (797aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30335.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
DNA translocase FtsK
L2_059_000G1_scaffold_125_5
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5185..6855
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQJ9_9FIRM
L2_059_000G1_scaffold_125_6
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6918..8243
DNA (1326bp) protein (442aa)
Tetratricopeptide repeat protein n=2 Tax=Clostridiales RepID=B0NAY3_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30333.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Tetratricopeptide repeat.
L2_059_000G1_scaffold_125_7
unknown

Not on your lists

8246..8374
DNA (129bp) protein (43aa)

This feature has no annotations

L2_059_000G1_scaffold_125_8
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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8430..9611
DNA (1182bp) protein (394aa)
NADPH-dependent butanol dehydrogenase n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JHB7_9FIRM
NADPH-dependent butanol dehydrogenase {ECO:0000313|EMBL:EOS33351.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
Alcohol dehydrogenase, class IV
L2_059_000G1_scaffold_125_9
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9781..10668
DNA (888bp) protein (296aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.97.-.- 1.18.1.2)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30332.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_059_000G1_scaffold_125_10
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10668..12056
DNA (1389bp) protein (463aa)
glutamate synthase (NADPH), homotetrameric (EC:1.4.1.13 1.4.1.14)
Glutamate synthase (NADPH), homotetrameric n=2 Tax=Clostridiales RepID=B0NAY1_CLOSV
Glutamate synthase, homotetrameric {ECO:0000313|EMBL:EGN30331.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_059_000G1_scaffold_125_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12219..12995
DNA (777bp) protein (259aa)
Metal cation transporter, ZIP family n=2 Tax=Clostridiales RepID=B0NAY0_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30330.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
zinc/iron permease
L2_059_000G1_scaffold_125_12
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13005..13628
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAX9_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08287.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L2_059_000G1_scaffold_125_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13644..14123
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQJ4_9FIRM
conserved hypothetical protein TIGR00246
L2_059_000G1_scaffold_125_14
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14246..15010
DNA (765bp) protein (255aa)
SCP-like protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAX7_CLOSV
SCP-like protein {ECO:0000313|EMBL:EDS08285.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Uncharacterized protein with SCP/PR1 domains
L2_059_000G1_scaffold_125_15
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15195..16118
DNA (924bp) protein (308aa)
LD-carboxypeptidase n=2 Tax=Clostridiales RepID=B0NAX6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30327.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
peptidase U61 LD-carboxypeptidase A
L2_059_000G1_scaffold_125_16
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16152..17222
DNA (1071bp) protein (357aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=Clostridiales RepID=B0NAX5_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30326.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
endonuclease/exonuclease/phosphatase family
L2_059_000G1_scaffold_125_17
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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17254..19515
DNA (2262bp) protein (754aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F7I8_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EFE46311.2}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
hypothetical protein
L2_059_000G1_scaffold_125_18
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19537..20862
DNA (1326bp) protein (442aa)
Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold (EC:3.1.1.3)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MW14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS75255.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L2_059_000G1_scaffold_125_19
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20961..21284
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NAX4_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30325.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_059_000G1_scaffold_125_20
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21434..21679
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30324.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
sporulation protein YqfC
L2_059_000G1_scaffold_125_21
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21694..22959
DNA (1266bp) protein (422aa)
Putative sporulation protein YqfD n=2 Tax=Clostridiales RepID=B0NAX2_CLOSV
Putative sporulation protein YqfD {ECO:0000313|EMBL:EDS08280.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Putative stage IV sporulation protein YqfD.
L2_059_000G1_scaffold_125_22
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22963..23955
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30321.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L2_059_000G1_scaffold_125_23
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23952..24446
DNA (495bp) protein (165aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Endoribonuclease YbeY n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAX0_CLOSV
conserved hypothetical protein TIGR00043
L2_059_000G1_scaffold_125_24
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24460..26130
DNA (1671bp) protein (557aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAW9_CLOSV
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDS08277.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L2_059_000G1_scaffold_125_25
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26210..26590
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NAW8_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30318.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_059_000G1_scaffold_125_26
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26666..26887
DNA (222bp) protein (74aa)
UPF0291 protein CLOSCI_00586 n=2 Tax=Clostridiales RepID=B0NAW7_CLOSV
UPF0291 protein HMPREF0993_01226 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_059_000G1_scaffold_125_27
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26835..27422
DNA (588bp) protein (196aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQI1_9FIRM
L2_059_000G1_scaffold_125_28
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27450..27632
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30315.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_059_000G1_scaffold_125_29
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27598..29037
DNA (1440bp) protein (480aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQH9_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
L2_059_000G1_scaffold_125_30
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29144..29560
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NAR0_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30313.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Predicted membrane protein
Displaying items 1-30 of 121 in total

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