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L2_059_000G1_scaffold_142

Search features with annotation key words

Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_142_1
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..545)
DNA (543bp) protein (181aa)
pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
Pyruvate formate-lyase activating enzyme n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U8V6_ETHHY
L2_059_000G1_scaffold_142_2
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(545..2773)
DNA (2229bp) protein (743aa)
formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YQM5_9FIRM
Formate acetyltransferase {ECO:0000313|EMBL:CDD30876.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L2_059_000G1_scaffold_142_3
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3065..3991)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LFX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS57458.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
nitrite and sulfite reductase subunit
L2_059_000G1_scaffold_142_4
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4189..4794
DNA (606bp) protein (202aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AHT3_9CLOT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CCX38916.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L2_059_000G1_scaffold_142_5
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5193..6767
DNA (1575bp) protein (525aa)
Cell envelope-related function transcriptional attenuator common domain n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVR2_9FIRM
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CCY33908.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
cell envelope-related function transcriptional attenuator common domain
L2_059_000G1_scaffold_142_6
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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6866..7543
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN42602.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_059_000G1_scaffold_142_7
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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7648..8148
DNA (501bp) protein (167aa)
Uncharacterized conserved protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y1H8_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDD29923.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L2_059_000G1_scaffold_142_8
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8155..9441
DNA (1287bp) protein (429aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Clostridium sp. CAG:352 RepID=R6R423_9CLOT
L2_059_000G1_scaffold_142_9
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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9481..10413
DNA (933bp) protein (311aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
orotidine 5'-phosphate decarboxylase, subfamily 2 (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YMU6_9FIRM
L2_059_000G1_scaffold_142_10
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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10435..11193
DNA (759bp) protein (253aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y7M8_9FIRM
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
L2_059_000G1_scaffold_142_11
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11193..12104
DNA (912bp) protein (304aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
dihydroorotate oxidase B, catalytic subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A3A3_9CLOT
L2_059_000G1_scaffold_142_12
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12187..12849
DNA (663bp) protein (221aa)
Phosphoglycerate mutase family protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6K0_9CLOT
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:CCX37354.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
phosphoglycerate mutase
L2_059_000G1_scaffold_142_13
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12944..13366
DNA (423bp) protein (141aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Putative Holliday junction resolvase n=1 Tax=Clostridium leptum CAG:27 RepID=R6MZC1_9CLOT
conserved hypothetical protein TIGR00250
L2_059_000G1_scaffold_142_14
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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13470..14339
DNA (870bp) protein (290aa)
EDD domain protein DegV family n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YMU0_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CDD29916.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
degV family protein
L2_059_000G1_scaffold_142_15
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14359..16422
DNA (2064bp) protein (688aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Beta-galactosidase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BG18_9CLOT
beta-galactosidase
L2_059_000G1_scaffold_142_16
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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16447..17031
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVU6_9FIRM
GNAT family acetyltransferase {ECO:0000313|EMBL:KJF40552.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
GNAT family acetyltransferase
L2_059_000G1_scaffold_142_17
Oceanobacillus oncorhynchi, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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17075..17716
DNA (642bp) protein (214aa)
Galactoside O-acetyltransferase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NM65_9CLOT
Galactoside O-acetyltransferase {ECO:0000313|EMBL:CEI83324.1}; TaxID=545501 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanobacillus oncorhynchi.;"
hypothetical protein
L2_059_000G1_scaffold_142_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(17778..18119)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R2Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91121.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
transcriptional regulator
L2_059_000G1_scaffold_142_19
Cryptobacterium sp. CAG:338, Cryptobacterium, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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18401..19405
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Cryptobacterium sp. CAG:338 RepID=R7CES6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD75808.1}; TaxID=1262868 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Cryptobacterium; environmental samples.;" source="Cryptobacterium sp. CAG:338.;"
NADH oxidase
L2_059_000G1_scaffold_142_20
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19466..20515)
DNA (1050bp) protein (350aa)
Oxidoreductase domain protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NFE8_9CLOT
Oxidoreductase domain protein {ECO:0000313|EMBL:CDC10878.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical oxidoreductase YdgJ
L2_059_000G1_scaffold_142_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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20799..21860
DNA (1062bp) protein (354aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=2 Tax=Clostridiales RepID=B0A7B4_9FIRM
L2_059_000G1_scaffold_142_22
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22586..23923
DNA (1338bp) protein (446aa)
Mg2+ transporter (MgtE) n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A8C8_9CLOT
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
mgtE; magnesium transporter
L2_059_000G1_scaffold_142_23
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24062..25900
DNA (1839bp) protein (613aa)
ATP-dependent DNA helicase, RecQ-like (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ-like n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I8P0_9FIRM
ATP-dependent DNA helicase RecQ-like {ECO:0000313|EMBL:CDB41811.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L2_059_000G1_scaffold_142_24
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(25885..26586)
DNA (702bp) protein (234aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YCA0_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
sigK; RNA polymerase sigma-28 factor
L2_059_000G1_scaffold_142_25
unknown

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26683..26790
DNA (108bp) protein (36aa)

This feature has no annotations

L2_059_000G1_scaffold_142_26
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26768..27178
DNA (411bp) protein (137aa)
Transcriptional regulator Fur family n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A882_9CLOT
Transcriptional regulator Fur family {ECO:0000313|EMBL:CCX38913.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Fe2+/Zn2+ uptake regulation proteins
L2_059_000G1_scaffold_142_27
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27202..27747
DNA (546bp) protein (182aa)
Rubrerythrin n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVU6_9FIRM
Rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:CBL21749.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_059_000G1_scaffold_142_28
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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27996..28802
DNA (807bp) protein (269aa)
Acetyl esterase family enzyme n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7S8_9FIRM
Acetyl esterase family enzyme {ECO:0000313|EMBL:CCY32841.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
acetyl esterase
L2_059_000G1_scaffold_142_29
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28866..30182
DNA (1317bp) protein (439aa)
UPI0003D69E00 related cluster n=1 Tax=unknown RepID=UPI0003D69E00
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHD06832.1}; TaxID=697284 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus larvae subsp. larvae DSM 25430.;"
L2_059_000G1_scaffold_142_30
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

30267..31241
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y1P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD27735.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
sugar kinase
Displaying items 1-30 of 111 in total

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