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L2_059_000G1_scaffold_191

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_191_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(143..931)
DNA (789bp) protein (263aa)
Uncharacterized protein with SCP/PR1 domains n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KXK5_9FIRM
Uncharacterized protein with SCP/PR1 domains
Uncharacterized protein with SCP/PR1 domains {ECO:0000313|EMBL:CBL12095.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_191_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1079..1717)
DNA (639bp) protein (213aa)
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Endonuclease III n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQW3_9FIRM
L2_059_000G1_scaffold_191_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1898..3103)
DNA (1206bp) protein (402aa)
Chloride transporter, ClC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GE71_9FIRM
Chloride transporter, ClC family {ECO:0000313|EMBL:EEU99860.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Chloride channel protein EriC
L2_059_000G1_scaffold_191_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3422..4948
DNA (1527bp) protein (509aa)
SSS sodium solute transporter superfamily n=2 Tax=Roseburia intestinalis RepID=D4KXK7_9FIRM
SSS sodium solute transporter superfamily
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:CBL12097.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_191_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5066..6592)
DNA (1527bp) protein (509aa)
Beta-xylosidase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KXK8_9FIRM
Beta-xylosidase
Beta-xylosidase {ECO:0000313|EMBL:CBL12098.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_191_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6662..7153)
DNA (492bp) protein (164aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KXK9_9FIRM
conserved hypothetical protein TIGR00246
L2_059_000G1_scaffold_191_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7317..7841
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7GE67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA55567.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_059_000G1_scaffold_191_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7907..8488
DNA (582bp) protein (194aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AUL7_9FIRM
L2_059_000G1_scaffold_191_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8582..9709)
DNA (1128bp) protein (376aa)
Tetratricopeptide repeat protein n=2 Tax=Roseburia RepID=C7GE65_9FIRM
Cell surface protein {ECO:0000313|EMBL:CDA55569.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_059_000G1_scaffold_191_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9733..11403)
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=4 Tax=Roseburia RepID=D4KQV7_9FIRM
L2_059_000G1_scaffold_191_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11422..14157)
DNA (2736bp) protein (912aa)
FtsK/SpoIIIE family protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B9B5_9FIRM
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:CDA55571.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
DNA translocase FtsK
L2_059_000G1_scaffold_191_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14209..15087)
DNA (879bp) protein (293aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GH69_9FIRM
L2_059_000G1_scaffold_191_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15191..15844)
DNA (654bp) protein (218aa)
Protease subunit of ATP-dependent Clp proteases n=4 Tax=Roseburia RepID=D4KXL3_9FIRM
Protease subunit of ATP-dependent Clp proteases
Protease subunit of ATP-dependent Clp proteases {ECO:0000313|EMBL:CBL12103.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_191_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16085..17536)
DNA (1452bp) protein (484aa)
glycogen/starch synthases, ADP-glucose type (EC:2.4.1.21)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484, ECO:0000313|EMBL:CBL09256.1};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Glycogen synthase n=3 Tax=Roseburia RepID=D4KXL4_9FIRM
L2_059_000G1_scaffold_191_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17726..18454)
DNA (729bp) protein (243aa)
Probable transcriptional regulatory protein BN501_00771 n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HNV9_9FIRM
conserved hypothetical protein TIGR01033
Probable transcriptional regulatory protein BN484_02247 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_059_000G1_scaffold_191_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18538..18885)
DNA (348bp) protein (116aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
mRNA interferase n=4 Tax=Roseburia RepID=D4KXL7_9FIRM
Growth inhibitor
L2_059_000G1_scaffold_191_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18958..20127)
DNA (1170bp) protein (390aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=2 Tax=Roseburia RepID=C7GH76_9FIRM
L2_059_000G1_scaffold_191_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20189..21727)
DNA (1539bp) protein (513aa)
YjeF C-terminal region hydroxyethylthiazole kinase-related/yjeF N-terminal region n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AX69_9FIRM
YjeF C-terminal region hydroxyethylthiazole kinase-related/yjeF N-terminal region {ECO:0000313|EMBL:CDA55580.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
L2_059_000G1_scaffold_191_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21854..22519)
DNA (666bp) protein (222aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BQN5_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
redox-sensing transcriptional repressor Rex
L2_059_000G1_scaffold_191_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22594..24537)
DNA (1944bp) protein (648aa)
ATPase components of ABC transporters with duplicated ATPase domains n=2 Tax=Roseburia RepID=R6B3I4_9FIRM
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CDA55584.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ATPase components of ABC transporters with duplicated ATPase domains
L2_059_000G1_scaffold_191_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24534..25745)
DNA (1212bp) protein (404aa)
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108, ECO:0000313|EMBL:CBL12111.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Isocitrate dehydrogenase [NADP] n=4 Tax=Roseburia RepID=D4KXM1_9FIRM
L2_059_000G1_scaffold_191_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25760..26419)
DNA (660bp) protein (220aa)
Transcriptional regulator, GntR family n=4 Tax=Roseburia RepID=D4KQU7_9FIRM
transcriptional regulator, GntR family
FCD domain protein {ECO:0000313|EMBL:EEU98813.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_059_000G1_scaffold_191_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26430..27914)
DNA (1485bp) protein (495aa)
Isopropylmalate/homocitrate/citramalate synthases n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KXM3_9FIRM
Isopropylmalate/homocitrate/citramalate synthases
Isopropylmalate/homocitrate/citramalate synthases {ECO:0000313|EMBL:CBL12113.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_191_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28447..28611)
DNA (165bp) protein (55aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7GH87_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55592.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_059_000G1_scaffold_191_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28743..29069
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GH88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98818.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_059_000G1_scaffold_191_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29128..29406
DNA (279bp) protein (93aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GH89_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55595.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_059_000G1_scaffold_191_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29483..30808)
DNA (1326bp) protein (442aa)
Listeria/Bacterioides repeat n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B9C9_9FIRM
Listeria/Bacterioides repeat {ECO:0000313|EMBL:CDA55596.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Listeria/Bacterioides repeat
L2_059_000G1_scaffold_191_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30916..33009)
DNA (2094bp) protein (698aa)
Translation elongation factor 2 (EF-2/EF-G) {ECO:0000313|EMBL:CBL12119.1}; EC=3.6.5.3 {ECO:0000313|EMBL:CBL12119.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Translation elongation factor 2 (EF-2/EF-G) n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KXM9_9FIRM
L2_059_000G1_scaffold_191_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33359..34456
DNA (1098bp) protein (366aa)
Prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase {ECO:0000313|EMBL:CBL09240.1}; EC=1.3.1.12 {ECO:0000313|EMBL:CBL09240.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Prephenate dehydrogenase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQT8_9FIRM
L2_059_000G1_scaffold_191_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34829..35710
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B3J3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA55599.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
Displaying items 1-30 of 85 in total

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