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L2_059_000G1_scaffold_193

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_193_1
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..442)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HM04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97512.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
streptomycin adenylyltransferase
L2_059_000G1_scaffold_193_2
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(590..1330)
DNA (741bp) protein (247aa)
Methyltransferase domain protein n=2 Tax=Erysipelotrichaceae RepID=B0N318_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EDS18840.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L2_059_000G1_scaffold_193_3
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1434..2057)
DNA (624bp) protein (208aa)
Maltose O-acetyltransferase family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CQZ4_9CLOT
Maltose O-acetyltransferase family protein {ECO:0000313|EMBL:ERI71667.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
maa; maltose O-acetyltransferase
L2_059_000G1_scaffold_193_4
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2149..3054)
DNA (906bp) protein (302aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
dihydroorotate dehydrogenase (subfamily 1) family protein (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=4 Tax=Lachnospiraceae RepID=E9RYT4_9FIRM
L2_059_000G1_scaffold_193_5
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3054..3836)
DNA (783bp) protein (261aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=5 Tax=Clostridiales RepID=A5KIH0_9FIRM
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
L2_059_000G1_scaffold_193_6
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3865..4785)
DNA (921bp) protein (307aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
orotidine 5'-phosphate decarboxylase, subfamily 2 (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=3 Tax=Dorea RepID=B0G896_9FIRM
L2_059_000G1_scaffold_193_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4791..6128)
DNA (1338bp) protein (446aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
dihydroorotase, multifunctional complex type (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJD0_9CLOT
L2_059_000G1_scaffold_193_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6223..7431)
DNA (1209bp) protein (403aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
Putative phage prohead protease, HK97 family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKP6_9FIRM
Putative phage prohead protease, HK97 family {ECO:0000313|EMBL:EDM61749.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L2_059_000G1_scaffold_193_9
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7456..8655)
DNA (1200bp) protein (400aa)
Peptidase, M23 family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKP7_9FIRM
Peptidase, M23 family {ECO:0000313|EMBL:EDM61750.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Membrane-bound metallopeptidase
L2_059_000G1_scaffold_193_10
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8676..9584)
DNA (909bp) protein (303aa)
Cell division protein FtsX n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C461_9CLOT
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
cell division protein FtsX
L2_059_000G1_scaffold_193_11
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9574..10260)
DNA (687bp) protein (229aa)
Cell division ATP-binding protein FtsE n=1 Tax=Dorea sp. CAG:105 RepID=R5DE71_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CCX74216.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
cell division ATP-binding protein FtsE
L2_059_000G1_scaffold_193_12
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10309..11397)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RYU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD61678.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
transcriptional regulator, CdaR family
L2_059_000G1_scaffold_193_13
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11598..12350)
DNA (753bp) protein (251aa)
Glycosyltransferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:EDS04910.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDS04910.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Glycosyltransferase, WecB/TagA/CpsF family n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NKK6_CLOSV
Teichoic acid biosynthesis proteins
L2_059_000G1_scaffold_193_14
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(12504..12701)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VHN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC91766.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Small, acid-soluble spore proteins, alpha/beta type.
L2_059_000G1_scaffold_193_15
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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comp(12761..12955)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5YCA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA14197.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
phage shock protein C, PspC
L2_059_000G1_scaffold_193_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13000..13824)
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YUJ5_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94565.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L2_059_000G1_scaffold_193_17
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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comp(13824..14546)
DNA (723bp) protein (241aa)
Integral membrane protein (Putative) n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XH92_9FIRM
Integral membrane protein (Putative) {ECO:0000313|EMBL:CDA14195.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
Predicted membrane protein
L2_059_000G1_scaffold_193_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14546..14893)
DNA (348bp) protein (116aa)
Transcriptional regulator, PadR family n=1 Tax=Clostridium sp. D5 RepID=F0YUJ3_9CLOT
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EGB94563.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
transcriptional regulator, PadR family
L2_059_000G1_scaffold_193_19
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15078..15461
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VVB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72321.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
GntR family transcriptional regulator
L2_059_000G1_scaffold_193_20
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15442..16302
DNA (861bp) protein (287aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZK9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS75856.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
putative ABC transport system ATP-binding protein
L2_059_000G1_scaffold_193_21
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16304..17026
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VVB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88220.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_059_000G1_scaffold_193_22
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17115..17663)
DNA (549bp) protein (183aa)
Putative fluoride ion transporter CrcB n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0R792_9FIRM
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum F0468.;"
CrcB-like protein
L2_059_000G1_scaffold_193_23
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17767..21348)
DNA (3582bp) protein (1194aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YHD0_9FIRM
recombination helicase AddA, Firmicutes type
L2_059_000G1_scaffold_193_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21354..24701)
DNA (3348bp) protein (1116aa)
ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Clostridium nexile CAG:348 RepID=R6QK12_9CLOT
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000313|EMBL:CDC22297.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ATP-dependent nuclease subunit B
L2_059_000G1_scaffold_193_25
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24711..25949)
DNA (1239bp) protein (413aa)
GTPase HflX n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BCI5_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
GTP-binding proten HflX
L2_059_000G1_scaffold_193_26
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25946..26479)
DNA (534bp) protein (178aa)
Tetratricopeptide repeat protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BDJ9_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEG88545.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Tetratricopeptide repeat.
L2_059_000G1_scaffold_193_27
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26516..26887)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BCI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81515.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
ArsR family transcriptional regulator
L2_059_000G1_scaffold_193_28
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26891..27580)
DNA (690bp) protein (230aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=2 Tax=Lachnospiraceae RepID=E9RYY5_9FIRM
L2_059_000G1_scaffold_193_29
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27595..28359)
DNA (765bp) protein (255aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
imidazoleglycerol phosphate synthase, cyclase subunit (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9M9T5_9FIRM
L2_059_000G1_scaffold_193_30
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28364..28978)
DNA (615bp) protein (205aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Coprococcus comes CAG:19 RepID=R6LDY1_9FIRM
Displaying items 1-30 of 100 in total

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