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L2_059_000G1_scaffold_200

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_200_1
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..137)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z687_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11089.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L2_059_000G1_scaffold_200_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(204..776)
DNA (573bp) protein (191aa)
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZIJ1_9PORP
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN11090.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
RNA polymerase sigma-70 factor
L2_059_000G1_scaffold_200_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(889..2085)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZHY8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11091.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_000G1_scaffold_200_4
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2235..3062
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B7B5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC97680.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
L2_059_000G1_scaffold_200_5
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3163..4377
DNA (1215bp) protein (405aa)
Drug resistance transporter, Bcr/CflA subfamily n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K6A5Y4_9PORP
Drug resistance transporter, Bcr/CflA subfamily {ECO:0000313|EMBL:EKN11093.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
drug resistance transporter, Bcr/CflA subfamily
L2_059_000G1_scaffold_200_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4795..5763)
DNA (969bp) protein (323aa)
Peptidyl-tRNA hydrolase domain protein n=3 Tax=Parabacteroides RepID=B7B7B2_9PORP
Peptidyl-tRNA hydrolase domain protein {ECO:0000313|EMBL:EEC97677.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
peptide chain release factor RF-2
L2_059_000G1_scaffold_200_7
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6164..7984)
DNA (1821bp) protein (607aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZIJ7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77438.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
long-chain-fatty-acid-CoA ligase
L2_059_000G1_scaffold_200_8
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8172..8498
DNA (327bp) protein (109aa)
Transcriptional regulator, PadR family n=7 Tax=Parabacteroides RepID=A7AB76_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77439.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_059_000G1_scaffold_200_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8511..9602
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5YCE9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11097.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_000G1_scaffold_200_10
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9604..9723)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DN77_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77441.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L2_059_000G1_scaffold_200_11
unknown

Not on your lists

comp(9764..9931)
DNA (168bp) protein (56aa)

This feature has no annotations

L2_059_000G1_scaffold_200_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9964..10359)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z697_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11099.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
histidine triad (HIT) family protein
L2_059_000G1_scaffold_200_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10372..10842)
DNA (471bp) protein (157aa)
Transcription elongation factor GreA n=3 Tax=Parabacteroides RepID=B7B7A7_9PORP
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
transcription elongation factor GreA
L2_059_000G1_scaffold_200_14
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11061..12221)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZI00_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77444.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_059_000G1_scaffold_200_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12417..14648
DNA (2232bp) protein (744aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Polyribonucleotide nucleotidyltransferase n=2 Tax=Parabacteroides RepID=B7B7A4_9PORP
polynucleotide phosphorylase
L2_059_000G1_scaffold_200_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15023..15157)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K6A5Z5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11103.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L2_059_000G1_scaffold_200_17
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15281..15409)
DNA (129bp) protein (43aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B7A1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78296.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L2_059_000G1_scaffold_200_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15566..17206)
DNA (1641bp) protein (547aa)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=2 Tax=Parabacteroides johnsonii RepID=B7B7A0_9PORP
Fumarate hydratase class I, aerobic {ECO:0000313|EMBL:EKN11105.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
anaerobic fumarate hydratase class I
L2_059_000G1_scaffold_200_19
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17353..18063
DNA (711bp) protein (237aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZI05_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78294.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
transcriptional regulator
L2_059_000G1_scaffold_200_20
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18076..19362
DNA (1287bp) protein (429aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Parabacteroides RepID=B7B798_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78293.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
two-component system sensor histidine kinase
L2_059_000G1_scaffold_200_21
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19359..20372
DNA (1014bp) protein (338aa)
Cobalamin biosynthesis protein CobD n=3 Tax=Parabacteroides RepID=B7B797_9PORP
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
cobalamin biosynthesis protein CbiB
L2_059_000G1_scaffold_200_22
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20388..20993
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z6A8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11109.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
pseudouridine synthase
L2_059_000G1_scaffold_200_23
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20998..21513
DNA (516bp) protein (172aa)
Adenosylcobinamide kinase/adenosylcobinamidephosphate guanylyltransferase n=3 Tax=Parabacteroides RepID=B7B795_9PORP
Adenosylcobinamide kinase/adenosylcobinamidephosphate guanylyltransferase {ECO:0000313|EMBL:EEC97702.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
cobinamide kinase
L2_059_000G1_scaffold_200_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21529..22566
DNA (1038bp) protein (346aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZI10_9PORP
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
L2_059_000G1_scaffold_200_25
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22592..23344
DNA (753bp) protein (251aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Cobalamin synthase n=3 Tax=Parabacteroides RepID=B7B793_9PORP
cobalamin 5'-phosphate synthase
L2_059_000G1_scaffold_200_26
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23357..23890
DNA (534bp) protein (178aa)
Alpha-ribazole phosphatase n=2 Tax=Parabacteroides RepID=B7B792_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78287.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
phosphoglycerate mutase
L2_059_000G1_scaffold_200_27
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24093..24935)
DNA (843bp) protein (281aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B790_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11114.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_000G1_scaffold_200_28
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24963..25400)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZIL7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11115.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_000G1_scaffold_200_29
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25528..27183
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZI17_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11116.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
lysyl endopeptidase
L2_059_000G1_scaffold_200_30
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27427..29118
DNA (1692bp) protein (564aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B787_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC97694.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
Displaying items 1-30 of 83 in total

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