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L2_059_000G1_scaffold_202

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_202_1

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comp(115..549)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1SWL3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC59759.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_059_000G1_scaffold_202_2

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comp(566..907)
DNA (342bp) protein (114aa)
Bacterial mobilization protein n=1 Tax=human gut metagenome RepID=K1T5E9_9ZZZZ
Bacterial mobilization protein {ECO:0000313|EMBL:EKC62824.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_059_000G1_scaffold_202_3
unknown

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comp(1037..2002)
DNA (966bp) protein (322aa)

This feature has no annotations

L2_059_000G1_scaffold_202_4
unknown

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comp(2015..4675)
DNA (2661bp) protein (887aa)

This feature has no annotations

L2_059_000G1_scaffold_202_5
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(4699..7185)
DNA (2487bp) protein (829aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00035E54C2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC57556.1}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp123.;"
L2_059_000G1_scaffold_202_6

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comp(7522..8289)
DNA (768bp) protein (256aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1RN36_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC46788.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_059_000G1_scaffold_202_7
Actinomyces sp. oral taxon 178, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8361..8567)
DNA (207bp) protein (69aa)
MFS family major facilitator superfamily transporter n=3 Tax=Actinomyces RepID=E8JJ84_9ACTO
MFS family major facilitator superfamily transporter {ECO:0000313|EMBL:EFW09459.1}; TaxID=888051 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 178 str. F0338.;"
permease
L2_059_000G1_scaffold_202_8
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(8583..10373)
DNA (1791bp) protein (597aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium EnGen0263 RepID=R2M505_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EOH54712.1}; TaxID=1158553 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0263.;"
conjugal transfer protein
L2_059_000G1_scaffold_202_9

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comp(10370..10816)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1SP07_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC59343.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_059_000G1_scaffold_202_10
unknown

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comp(10882..11367)
DNA (486bp) protein (162aa)

This feature has no annotations

L2_059_000G1_scaffold_202_11
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11369..17431)
DNA (6063bp) protein (2021aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TTZ4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KJF39253.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Cna protein B-type domain.
L2_059_000G1_scaffold_202_12

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comp(17558..17887)
DNA (330bp) protein (110aa)
Transcriptional regulator, BlaI/MecI/CopY family n=1 Tax=human gut metagenome RepID=K1TMA8_9ZZZZ
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EKC60466.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_000G1_scaffold_202_13

Not on your lists

comp(17898..18617)
DNA (720bp) protein (240aa)
Protein containing SCP-like extracellular domain protein (Fragment) n=1 Tax=human gut metagenome RepID=K1T2X3_9ZZZZ
Protein containing SCP-like extracellular domain protein {ECO:0000313|EMBL:EKC60465.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_059_000G1_scaffold_202_14
unknown

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comp(18626..18949)
DNA (324bp) protein (108aa)

This feature has no annotations

L2_059_000G1_scaffold_202_15
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19007..26542)
DNA (7536bp) protein (2512aa)
N-6 DNA Methylase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRU4_9FIRM
N-6 DNA Methylase {ECO:0000313|EMBL:EFB74635.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Superfamily II DNA and RNA helicase
L2_059_000G1_scaffold_202_16

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comp(26547..27611)
DNA (1065bp) protein (355aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1UEQ7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC78479.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_059_000G1_scaffold_202_17

Not on your lists

comp(27613..28578)
DNA (966bp) protein (322aa)
ParB-like partition protein n=1 Tax=human gut metagenome RepID=K1UK39_9ZZZZ
ParB-like partition protein {ECO:0000313|EMBL:EKC78480.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
parB-like partition protein
L2_059_000G1_scaffold_202_18
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28526..29365)
DNA (840bp) protein (280aa)
Chromosome partitioning protein ParA n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KY08_OSCVS
parA; chromosome partitioning protein ParA
Chromosome partitioning protein ParA {ECO:0000313|EMBL:BAK98612.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_059_000G1_scaffold_202_19

Not on your lists

comp(29362..30342)
DNA (981bp) protein (327aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1UPT9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC80180.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
toprim domain-containing protein
L2_059_000G1_scaffold_202_20

Not on your lists

comp(30469..30855)
DNA (387bp) protein (129aa)
Replication initiator protein A (RepA) n=1 Tax=human gut metagenome RepID=K1TQ47_9ZZZZ
Replication initiator protein A (RepA) {ECO:0000313|EMBL:EKC71838.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Replication initiator protein A (RepA) N-terminus.
L2_059_000G1_scaffold_202_21
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30939..31826)
DNA (888bp) protein (296aa)
ParB-like protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DE94_CLOS4
ParB-like protein {ECO:0000313|EMBL:ERJ01155.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
plasmid stablization protein ParB
L2_059_000G1_scaffold_202_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32113..34779)
DNA (2667bp) protein (889aa)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EFB75984.1}; EC=2.7.9.1 {ECO:0000313|EMBL:EFB75984.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN49_9FIRM
L2_059_000G1_scaffold_202_23
unknown

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comp(35049..35216)
DNA (168bp) protein (56aa)

This feature has no annotations

L2_059_000G1_scaffold_202_24
unknown

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comp(35182..35364)
DNA (183bp) protein (61aa)

This feature has no annotations

L2_059_000G1_scaffold_202_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35643..36377
DNA (735bp) protein (245aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN51_9FIRM
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EFB75986.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_059_000G1_scaffold_202_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36443..37030
DNA (588bp) protein (196aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN54_9FIRM
L2_059_000G1_scaffold_202_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37045..37587
DNA (543bp) protein (181aa)
dnaX; DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
SH3 domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN55_9FIRM
SH3 domain protein {ECO:0000313|EMBL:EFB75990.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_059_000G1_scaffold_202_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37594..41034
DNA (3441bp) protein (1147aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
transcription-repair coupling factor (EC:3.6.1.-)
Transcription-repair-coupling factor n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN58_9FIRM
L2_059_000G1_scaffold_202_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41170..42348)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77541.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_059_000G1_scaffold_202_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42422..43579)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77540.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
Displaying items 1-30 of 73 in total

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