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L2_059_000G1_scaffold_206

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Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_206_1
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..267
DNA (267bp) protein (89aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Dorea sp. CAG:317 RepID=R6W645_9FIRM
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:CDD06523.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L2_059_000G1_scaffold_206_2
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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380..1513
DNA (1134bp) protein (378aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=5 Tax=Clostridiales RepID=A5KQ94_9FIRM
L2_059_000G1_scaffold_206_3
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1603..1932
DNA (330bp) protein (110aa)
Preprotein translocase, YajC subunit n=2 Tax=Clostridiales RepID=D4M5M8_9FIRM
preprotein translocase, YajC subunit
Preprotein translocase YajC subunit {ECO:0000313|EMBL:CDC15897.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_000G1_scaffold_206_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2156..3238
DNA (1083bp) protein (361aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUD1_9FIRM
L2_059_000G1_scaffold_206_5
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3276..4946
DNA (1671bp) protein (557aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3C1_9CLOT
L2_059_000G1_scaffold_206_6
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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4965..6641
DNA (1677bp) protein (559aa)
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:EDR47945.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EDR47945.1};; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G2Y1_9FIRM
L2_059_000G1_scaffold_206_7
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6699..7781
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RZH2_9CLOT
L2_059_000G1_scaffold_206_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7781..8944
DNA (1164bp) protein (388aa)
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
4-phosphoerythronate dehydrogenase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSH4_9FIRM
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:CCZ66214.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_059_000G1_scaffold_206_9
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9052..9579
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B8R7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79369.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L2_059_000G1_scaffold_206_10
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9944..10957
DNA (1014bp) protein (338aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=2 Tax=Coprococcus RepID=C0BBE2_9FIRM
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:CDB86180.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L2_059_000G1_scaffold_206_11
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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10977..12035
DNA (1059bp) protein (353aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Dorea sp. 5-2 RepID=R9MQJ7_9FIRM
L2_059_000G1_scaffold_206_12
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12077..13264)
DNA (1188bp) protein (396aa)
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:EEG73302.1}; EC=2.7.6.1 {ECO:0000313|EMBL:EEG73302.1};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3C6_9CLOT
L2_059_000G1_scaffold_206_13
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13444..14772
DNA (1329bp) protein (443aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ALA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86275.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Fe-S oxidoreductase, related to NifB/MoaA family
L2_059_000G1_scaffold_206_14
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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14774..16102
DNA (1329bp) protein (443aa)
GTPase Der n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JPR2_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
ribosome-associated GTPase EngA
L2_059_000G1_scaffold_206_15
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16106..16750
DNA (645bp) protein (215aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3C9_9CLOT
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
acyl-phosphate glycerol-3-phosphate acyltransferase
L2_059_000G1_scaffold_206_16
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16761..17792
DNA (1032bp) protein (344aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=3 Tax=Lachnospiraceae RepID=E9RV66_9FIRM
L2_059_000G1_scaffold_206_17
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17855..19327
DNA (1473bp) protein (491aa)
Stage IV sporulation protein A n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3E2_9CLOT
Stage IV sporulation protein A {ECO:0000313|EMBL:EEG73318.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
stage IV sporulation protein A
L2_059_000G1_scaffold_206_18
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19428..19754
DNA (327bp) protein (109aa)
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase (EC:2.7.1.156 2.7.7.62)
hypothetical protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C9A
Uncharacterized protein {ECO:0000313|EMBL:CDF46306.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
L2_059_000G1_scaffold_206_19
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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19751..20245
DNA (495bp) protein (165aa)
Siroheme synthase domain-containing protein n=2 Tax=Coprococcus RepID=S2YN10_9FIRM
Siroheme synthase domain-containing protein {ECO:0000313|EMBL:EPD64825.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
siroheme synthase
L2_059_000G1_scaffold_206_20
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20242..20943
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3E6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG73322.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L2_059_000G1_scaffold_206_21
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20944..21435
DNA (492bp) protein (164aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Ribonuclease HI (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P0E6_9FIRM
L2_059_000G1_scaffold_206_22
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21900..22232)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5F6Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO86937.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
stage 0 sporulation protein A
L2_059_000G1_scaffold_206_23
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22484..22921)
DNA (438bp) protein (146aa)
Aspartate carbamoyltransferase, regulatory subunit n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZNH5_9FIRM
Aspartate carbamoyltransferase, regulatory subunit {ECO:0000313|EMBL:EPD65479.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Aspartate carbamoyltransferase, regulatory subunit
L2_059_000G1_scaffold_206_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22950..23870)
DNA (921bp) protein (307aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=2 Tax=Clostridiales RepID=F7JVQ6_9FIRM
L2_059_000G1_scaffold_206_25
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24013..25143
DNA (1131bp) protein (377aa)
Prephenate dehydratase (EC:4.2.1.51)
Uncharacterized protein n=2 Tax=Dorea RepID=R6SCZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX67788.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L2_059_000G1_scaffold_206_26
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25168..26460
DNA (1293bp) protein (431aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KQ54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26191.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Predicted ATPase (AAA+ superfamily)
L2_059_000G1_scaffold_206_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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26500..27786
DNA (1287bp) protein (429aa)
UPF0597 protein CLONEX_00438 n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJZ6_9CLOT
UPF0597 protein CLONEX_00438 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_059_000G1_scaffold_206_28
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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27848..28549
DNA (702bp) protein (234aa)
Hydrolase, NUDIX family n=2 Tax=Ruminococcus lactaris RepID=B5CL16_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDY34079.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
ADP-ribose pyrophosphatase
L2_059_000G1_scaffold_206_29
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28565..29521
DNA (957bp) protein (319aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=2 Tax=Ruminococcus lactaris RepID=B5CSJ1_9FIRM
L2_059_000G1_scaffold_206_30
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29542..30282
DNA (741bp) protein (247aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BA55_9FIRM
Displaying items 1-30 of 97 in total

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