ggKbase home page

L2_059_000G1_scaffold_311

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_311_1
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(291..839)
DNA (549bp) protein (183aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y0C2_9PORP
RNA polymerase {ECO:0000313|EMBL:GAE82514.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
ECF subfamily RNA polymerase sigma-24 subunit
L2_059_000G1_scaffold_311_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(826..1362)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZST1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06478.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_000G1_scaffold_311_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1367..1654)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5YTX0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06479.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
ferredoxin
L2_059_000G1_scaffold_311_4
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1869..2957
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z5W3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06480.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
GCN5-related N-acetyltransferase
L2_059_000G1_scaffold_311_5
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2936..3988
DNA (1053bp) protein (351aa)
Death-on-curing family protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B8C1_9PORP
Death-on-curing family protein {ECO:0000313|EMBL:EEC97326.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
filamentation induced by cAMP protein fic
L2_059_000G1_scaffold_311_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3990..4454
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z548_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06481.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
alanyl-tRNA synthetase
L2_059_000G1_scaffold_311_7
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4543..5547)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=R5DA16_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77068.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
ABC-type transport, permease
L2_059_000G1_scaffold_311_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5492..6232)
DNA (741bp) protein (247aa)
Phosphonate-transporting ATPase (EC:3.6.3.28)
ABC transporter, ATP-binding protein n=3 Tax=Parabacteroides RepID=B7B8B8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06483.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L2_059_000G1_scaffold_311_9
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6236..7381)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7B8B7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77066.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_059_000G1_scaffold_311_10
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7567..8922
DNA (1356bp) protein (452aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B8B6_9PORP
L2_059_000G1_scaffold_311_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


9110..10591
DNA (1482bp) protein (494aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=2 Tax=Parabacteroides RepID=K5Z553_9PORP
L2_059_000G1_scaffold_311_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10742..12301
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y0D2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06487.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
ABC transporter ATP-binding protein
L2_059_000G1_scaffold_311_13
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12402..14168
DNA (1767bp) protein (589aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K5ZSU3_9PORP
Putative dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:CCX77062.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_059_000G1_scaffold_311_14
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14169..15509)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DM91_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77061.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
oxidoreductase domain-containing protein
L2_059_000G1_scaffold_311_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15530..16909)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B8B0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06490.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_000G1_scaffold_311_16
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17314..17958
DNA (645bp) protein (215aa)
HAD hydrolase, family IA, variant 3 n=2 Tax=Parabacteroides RepID=B7B8A9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77059.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
phosphatase
L2_059_000G1_scaffold_311_17
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18050..18508)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y0D7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06492.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_000G1_scaffold_311_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18597..20216)
DNA (1620bp) protein (540aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZSU8_9PORP
Peptidase, C69 family {ECO:0000313|EMBL:EEC97340.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
dipeptidase
L2_059_000G1_scaffold_311_19
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20249..21658)
DNA (1410bp) protein (470aa)
Citrate transporter n=2 Tax=Parabacteroides johnsonii RepID=B7B8A6_9PORP
Citrate transporter {ECO:0000313|EMBL:EEC97339.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Na+/H+ antiporter
L2_059_000G1_scaffold_311_20
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21817..22653)
DNA (837bp) protein (279aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Probable endonuclease 4 n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z5X5_9PORP
endonuclease IV
L2_059_000G1_scaffold_311_21
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22675..23148)
DNA (474bp) protein (158aa)
Thioesterase family protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B8A4_9PORP
Thioesterase family protein {ECO:0000313|EMBL:EEC97337.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_059_000G1_scaffold_311_22
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23217..23693)
DNA (477bp) protein (159aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B8A3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77053.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_059_000G1_scaffold_311_23
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23810..24043)
DNA (234bp) protein (78aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZSV3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77052.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_059_000G1_scaffold_311_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24136..24462)
DNA (327bp) protein (109aa)
Cupin domain protein n=2 Tax=Parabacteroides johnsonii RepID=B7B8A1_9PORP
Cupin domain protein {ECO:0000313|EMBL:EEC97334.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_059_000G1_scaffold_311_25
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24563..25894)
DNA (1332bp) protein (444aa)
PhoH family protein n=3 Tax=Parabacteroides RepID=B7B8A0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06500.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
PhoH-like protein
L2_059_000G1_scaffold_311_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26019..26198)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AG14_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86069.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_059_000G1_scaffold_311_27
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26212..27432
DNA (1221bp) protein (407aa)
Glycosyl hydrolase family 20, catalytic domain protein n=3 Tax=Parabacteroides RepID=B7B898_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06501.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
putative hydrolase exported protein
L2_059_000G1_scaffold_311_28
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27616..28824
DNA (1209bp) protein (403aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B897_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77048.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_059_000G1_scaffold_311_29
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28710..29153)
DNA (444bp) protein (148aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=K5ZSV7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06503.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L2_059_000G1_scaffold_311_30
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29370..31490)
DNA (2121bp) protein (707aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5YTZ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06504.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
peptidyl-dipeptidase
Displaying items 1-30 of 69 in total

View Taxonomy