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L2_059_000G1_scaffold_315

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_315_1
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

248..1621
DNA (1374bp) protein (458aa)
Transporter n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ERY7_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Na+-dependent transporters of the SNF family
L2_059_000G1_scaffold_315_2
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(1800..3482)
DNA (1683bp) protein (561aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EQY4_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDA99554.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC-type multidrug transport system, ATPase and permease components
L2_059_000G1_scaffold_315_3
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(3469..5280)
DNA (1812bp) protein (604aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EG63_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDA99558.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC-type multidrug transport system, ATPase and permease components
L2_059_000G1_scaffold_315_4
unknown

Not on your lists

comp(5228..5413)
DNA (186bp) protein (62aa)

This feature has no annotations

L2_059_000G1_scaffold_315_5
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(5418..6287)
DNA (870bp) protein (290aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
5,10-methylenetetrahydrofolate reductase, prokaryotic form (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EI78_9FIRM
L2_059_000G1_scaffold_315_6
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(6337..7074)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FBX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99562.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_059_000G1_scaffold_315_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7221..8183)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94357.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_059_000G1_scaffold_315_8

Not on your lists

comp(8273..9757)
DNA (1485bp) protein (495aa)
Two component transcriptional regulator, AraC family (Fragment) n=1 Tax=human gut metagenome RepID=K1RNV8_9ZZZZ
Two component transcriptional regulator, AraC family {ECO:0000313|EMBL:EKC43330.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_059_000G1_scaffold_315_9
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9732..11645)
DNA (1914bp) protein (638aa)
HAMP domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LLL9_9FIRM
HAMP domain protein {ECO:0000313|EMBL:EET58483.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
putative HAMP domain-containing sensor
L2_059_000G1_scaffold_315_10
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11813..12670)
DNA (858bp) protein (286aa)
ABC transporter, permease protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LLM0_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EET58484.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
sugar permease
L2_059_000G1_scaffold_315_11
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12670..13554)
DNA (885bp) protein (295aa)
ABC transporter, permease protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LLM1_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EET58485.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
ABC transporter permease
L2_059_000G1_scaffold_315_12
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13635..15014)
DNA (1380bp) protein (460aa)
ABC transporter, solute-binding protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LLM2_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EET58486.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
ABC transporter substrate-binding protein
L2_059_000G1_scaffold_315_13
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15161..16822)
DNA (1662bp) protein (554aa)
Glycosyl hydrolase, family 43 n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B0K9_9CLOT
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:ERI65715.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
beta-xylosidase
L2_059_000G1_scaffold_315_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16872..17786)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W744_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98845.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
glycoside hydrolase family protein
L2_059_000G1_scaffold_315_15
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17790..18593)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LJB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET59230.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L2_059_000G1_scaffold_315_16
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18601..20655)
DNA (2055bp) protein (685aa)
Alpha-xylosidase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T7V6_9CLOT
Alpha-xylosidase {ECO:0000313|EMBL:CCZ61688.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
glycoside hydrolase
L2_059_000G1_scaffold_315_17
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20643..21524)
DNA (882bp) protein (294aa)
ROK family protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VQH4_9CLOT
ROK family protein {ECO:0000313|EMBL:CDC99275.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ROK family protein
L2_059_000G1_scaffold_315_18
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21572..22723)
DNA (1152bp) protein (384aa)
Unsaturated glucuronyl hydrolase {ECO:0000313|EMBL:EET59226.1}; EC=3.2.1.- {ECO:0000313|EMBL:EET59226.1};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Unsaturated glucuronyl hydrolase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LJB2_9FIRM
glycosyl hydrolase family protein
L2_059_000G1_scaffold_315_19
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22781..24139)
DNA (1359bp) protein (453aa)
Polygalacturonase {ECO:0000313|EMBL:KFI53782.1}; EC=3.2.1.15 {ECO:0000313|EMBL:KFI53782.1};; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI000370E9E2
polygalacturonase
L2_059_000G1_scaffold_315_20

Not on your lists

24252..25052
DNA (801bp) protein (267aa)
Protein containing Helix-turn-helix, AraC domain protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SCR9_9ZZZZ
Protein containing Helix-turn-helix, AraC domain protein {ECO:0000313|EMBL:EKC45131.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
AraC family transcriptional regulator
L2_059_000G1_scaffold_315_21
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(25036..26355)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FBY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99567.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L2_059_000G1_scaffold_315_22
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(26357..27073)
DNA (717bp) protein (239aa)
Response regulator receiver domain protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EQZ4_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA99569.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Response regulator of the LytR/AlgR family
L2_059_000G1_scaffold_315_23
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

27261..27683
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ES06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99571.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_059_000G1_scaffold_315_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27683..29746
DNA (2064bp) protein (688aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7E8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54364.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_059_000G1_scaffold_315_25
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(29813..30748)
DNA (936bp) protein (312aa)
Mannose-6-phosphate isomerase class I/beta-galactosidase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EG81_9FIRM
Mannose-6-phosphate isomerase class I/beta-galactosidase {ECO:0000313|EMBL:CDA99583.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
mannose-6-phosphate isomerase, class I/beta-galactosidase
L2_059_000G1_scaffold_315_26
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(30829..33585)
DNA (2757bp) protein (919aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EI94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99585.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_059_000G1_scaffold_315_27
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(33637..34659)
DNA (1023bp) protein (341aa)
Glycosidase related protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ES18_9FIRM
Glycosidase related protein {ECO:0000313|EMBL:CDA99586.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Predicted glycosylase
L2_059_000G1_scaffold_315_28
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34685..35860)
DNA (1176bp) protein (392aa)
4-O-beta-D-mannosyl-D-glucose phosphorylase {ECO:0000256|HAMAP-Rule:MF_00928}; Short=MGP {ECO:0000256|HAMAP-Rule:MF_00928};; Short=Mannosylglucose phosphorylase {ECO:0000256|HAMAP-Rule:MF_00928};; EC=2.4.1.281 {ECO:0000256|HAMAP-Rule:MF_00928};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
4-O-beta-D-mannosyl-D-glucose phosphorylase n=1 Tax=Clostridium sp. CAG:91 RepID=R6VV28_9CLOT
Predicted glycosylase
L2_059_000G1_scaffold_315_29
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(35939..37129)
DNA (1191bp) protein (397aa)
Cellobiose 2-epimerase {ECO:0000256|HAMAP-Rule:MF_00929}; Short=CE {ECO:0000256|HAMAP-Rule:MF_00929};; EC=5.1.3.11 {ECO:0000256|HAMAP-Rule:MF_00929};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Cellobiose 2-epimerase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EG87_9FIRM
N-acyl-D-glucosamine 2-epimerase
L2_059_000G1_scaffold_315_30
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37150..38016)
DNA (867bp) protein (289aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium sp. CAG:91 RepID=R6VV13_9CLOT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDD02543.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
binding-protein-dependent transport systems inner membrane component
Displaying items 1-30 of 68 in total

View Taxonomy