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L2_059_000G1_scaffold_323

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_323_1
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1251)
DNA (1251bp) protein (417aa)
nadB; L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQK1_9FIRM
L-aspartate oxidase {ECO:0000313|EMBL:CCZ78019.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_000G1_scaffold_323_2
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1339..2352)
DNA (1014bp) protein (338aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEG95596.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEG95596.1};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
glycosyl transferase n=1 Tax=Lachnobacterium bovis RepID=UPI0003B4EB42
glycosyltransferase
L2_059_000G1_scaffold_323_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2678..3814)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3R6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78031.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
A/G-specific DNA glycosylase
L2_059_000G1_scaffold_323_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3765..5072)
DNA (1308bp) protein (436aa)
Cyclomaltodextrinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBF9_9FIRM
Cyclomaltodextrinase {ECO:0000313|EMBL:CCZ78032.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
cyclomaltodextrinase
L2_059_000G1_scaffold_323_5

Not on your lists

comp(5113..5298)
DNA (186bp) protein (62aa)
Phage shock protein C, PspC n=1 Tax=human gut metagenome RepID=K1S7D3_9ZZZZ
Phage shock protein C, PspC {ECO:0000313|EMBL:EKC49610.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Putative stress-responsive transcriptional regulator
L2_059_000G1_scaffold_323_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5608..7617)
DNA (2010bp) protein (670aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ66_9FIRM
L2_059_000G1_scaffold_323_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7809..8612
DNA (804bp) protein (268aa)
Transcriptional regulator AraC family n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3S0_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ78036.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
AraC-type DNA-binding domain-containing proteins
L2_059_000G1_scaffold_323_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8642..9082)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78037.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_000G1_scaffold_323_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9104..9544)
DNA (441bp) protein (147aa)
PF08006 domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIG6_9FIRM
PF08006 domain protein {ECO:0000313|EMBL:CCZ78038.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_323_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9546..9890)
DNA (345bp) protein (115aa)
Putative PadR family transcriptional regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQL6_9FIRM
Putative PadR family transcriptional regulator {ECO:0000313|EMBL:CCZ78039.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative PadR family transcriptional regulator
L2_059_000G1_scaffold_323_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10025..11836)
DNA (1812bp) protein (604aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ70_9FIRM
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CCZ78040.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
lipopolysaccharide biosynthesis glycosyltransferase
L2_059_000G1_scaffold_323_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11881..12717)
DNA (837bp) protein (279aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3S3_9FIRM
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:CCZ78041.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glycosyl transferase family protein
L2_059_000G1_scaffold_323_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12714..13514)
DNA (801bp) protein (267aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBG6_9FIRM
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:CCZ78042.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
phospholipid/glycerol acyltransferase
L2_059_000G1_scaffold_323_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13750..14628
DNA (879bp) protein (293aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
pyridoxal phosphate synthase yaaD subunit (EC:4.-.-.-)
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIG9_9FIRM
L2_059_000G1_scaffold_323_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14631..15176
DNA (546bp) protein (182aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Glutamine amidotransferase subunit PdxT n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQL8_9FIRM
pyridoxal phosphate synthase yaaE subunit
L2_059_000G1_scaffold_323_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15361..15930)
DNA (570bp) protein (190aa)
Thiamine monophosphate synthase (EC:2.5.1.3)
Thiamine monophosphate synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ74_9FIRM
Thiamine monophosphate synthase {ECO:0000313|EMBL:CCZ78045.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_000G1_scaffold_323_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15911..17164)
DNA (1254bp) protein (418aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3S7_9FIRM
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:CCZ78046.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
thiH; thiamine biosynthesis protein ThiH
L2_059_000G1_scaffold_323_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17176..17997)
DNA (822bp) protein (274aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Thiazole synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBG9_9FIRM
thiazole-phosphate synthase
L2_059_000G1_scaffold_323_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18430..18648)
DNA (219bp) protein (73aa)
Sulfur carrier protein ThiS n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIH2_9FIRM
Sulfur carrier protein ThiS {ECO:0000313|EMBL:CCZ78048.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sulfur carrier protein ThiS
L2_059_000G1_scaffold_323_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18852..19598)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78049.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Tim44-like domain.
L2_059_000G1_scaffold_323_21
unknown

Not on your lists

comp(19713..19955)
DNA (243bp) protein (81aa)

This feature has no annotations

L2_059_000G1_scaffold_323_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20061..21035)
DNA (975bp) protein (325aa)
Penicillin V acylase and related amidases (EC:3.5.1.24)
Choloylglycine hydrolase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3T1_9FIRM
Choloylglycine hydrolase {ECO:0000313|EMBL:CCZ78051.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_000G1_scaffold_323_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21135..21680)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78052.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_323_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21713..22393)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78053.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_323_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22398..22916)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78054.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Transcriptional regulators
L2_059_000G1_scaffold_323_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22993..23910)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78055.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_323_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24157..26829)
DNA (2673bp) protein (891aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3T5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78056.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_323_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26826..27512)
DNA (687bp) protein (229aa)
ABC transporter related protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBH4_9FIRM
ABC transporter related protein {ECO:0000313|EMBL:CCZ78057.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
antimicrobial peptide ABC transporter ATPase
L2_059_000G1_scaffold_323_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27612..28547)
DNA (936bp) protein (312aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIH9_9FIRM
Signal transduction histidine kinase
L2_059_000G1_scaffold_323_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28544..29239)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VB47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77937.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Displaying items 1-30 of 71 in total

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