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L2_059_000G1_scaffold_353

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_353_1
unknown

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comp(3..212)
DNA (210bp) protein (70aa)

This feature has no annotations

L2_059_000G1_scaffold_353_2
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(233..1408)
DNA (1176bp) protein (392aa)
Antifreeze glycoprotein n=1 Tax=Arctogadus glacialis RepID=H2KMI7_ARCGL
Putative uncharacterized protein {ECO:0000313|EMBL:EGV18901.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
hypothetical protein
L2_059_000G1_scaffold_353_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1573..3054)
DNA (1482bp) protein (494aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSI1_9FIRM
L2_059_000G1_scaffold_353_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3284..4288)
DNA (1005bp) protein (335aa)
Transcriptional regulator, LacI family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSI0_9FIRM
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFB74360.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
PurR; transcriptional regulator
L2_059_000G1_scaffold_353_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4321..5169)
DNA (849bp) protein (283aa)
ABC transporter, permease protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSH9_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFB74359.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_059_000G1_scaffold_353_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5169..6020)
DNA (852bp) protein (284aa)
ABC transporter, permease protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSH8_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFB74358.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_059_000G1_scaffold_353_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6217..7587)
DNA (1371bp) protein (457aa)
ABC transporter, solute-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSH7_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFB74357.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_059_000G1_scaffold_353_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8114..9130)
DNA (1017bp) protein (339aa)
transcriptional regulator, LacI family (EC:5.1.1.1)
Alanine racemase n=1 Tax=Roseburia sp. CAG:18 RepID=R5USK0_9FIRM
Alanine racemase {ECO:0000313|EMBL:CCZ78709.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_000G1_scaffold_353_9

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comp(9248..12337)
DNA (3090bp) protein (1030aa)
Transglutaminase domain-containing protein n=1 Tax=human gut metagenome RepID=K1TK69_9ZZZZ
Transglutaminase domain-containing protein {ECO:0000313|EMBL:EKC66700.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Transglutaminase-like enzymes, putative cysteine proteases
L2_059_000G1_scaffold_353_10

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comp(12327..13283)
DNA (957bp) protein (319aa)
MoxR-like ATPases (EC:3.6.3.-)
Methanol dehydrogenase regulatory protein (Fragment) n=1 Tax=human gut metagenome RepID=K1T2T4_9ZZZZ
Methanol dehydrogenase regulatory protein {ECO:0000313|EMBL:EKC61919.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_059_000G1_scaffold_353_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13287..14279)
DNA (993bp) protein (331aa)
Sortase family protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P353_9FIRM
Sortase family protein {ECO:0000313|EMBL:CDC15149.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
sortase family protein
L2_059_000G1_scaffold_353_12
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14279..15157)
DNA (879bp) protein (293aa)
LPXTG-site transpeptidase (Sortase) family protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LUA6_9FIRM
LPXTG-site transpeptidase (sortase) family protein
LPXTG-site transpeptidase (Sortase) family protein {ECO:0000313|EMBL:CBL24364.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_059_000G1_scaffold_353_13
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15456..17690)
DNA (2235bp) protein (745aa)
Cna protein B-type domain n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LUA7_9FIRM
Cna protein B-type domain.
Cna protein B-type domain {ECO:0000313|EMBL:CBL24365.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_059_000G1_scaffold_353_14
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17746..22695)
DNA (4950bp) protein (1650aa)
Cna protein B-type domain n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LUA8_9FIRM
Cna protein B-type domain.
Cna protein B-type domain {ECO:0000313|EMBL:CBL24366.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_059_000G1_scaffold_353_15
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23213..24379)
DNA (1167bp) protein (389aa)
Putative hydroxymethylpyrimidine transporter CytX n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HGJ2_9FIRM
Putative hydroxymethylpyrimidine transporter CytX {ECO:0000313|EMBL:CDB25117.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative cytosine permease
L2_059_000G1_scaffold_353_16
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24376..25173)
DNA (798bp) protein (266aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TNR9_9FIRM
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CDC69506.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
L2_059_000G1_scaffold_353_17
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25289..25933)
DNA (645bp) protein (215aa)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED n=1 Tax=Roseburia sp. CAG:50 RepID=R5TQ51_9FIRM
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CCZ65459.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L2_059_000G1_scaffold_353_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25926..26567)
DNA (642bp) protein (214aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GI46_9FIRM
L2_059_000G1_scaffold_353_19
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26554..27375)
DNA (822bp) protein (274aa)
Hydroxyethylthiazole kinase, sugar kinase family (EC:2.7.1.50)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Hydroxyethylthiazole kinase n=1 Tax=Coprococcus catus GD/7 RepID=D4JBB5_9FIRM
L2_059_000G1_scaffold_353_20
Bacteroides pectinophilus CAG:437, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(27654..29081)
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Bacteroides pectinophilus CAG:437 RepID=R7ADF1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD56365.1}; TaxID=1263051 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides pectinophilus CAG:437.;"
hypothetical protein
L2_059_000G1_scaffold_353_21
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29087..30304)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=N9ZXY5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ50618.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
glycoside hydrolase family protein
L2_059_000G1_scaffold_353_22
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30330..32342)
DNA (2013bp) protein (671aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HHP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98884.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
rhamnogalacturonan lyase
L2_059_000G1_scaffold_353_23
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32424..33812)
DNA (1389bp) protein (463aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HHP4_9CLOT
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:KJJ70107.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
SCI39.29c; sugar-binding protein
L2_059_000G1_scaffold_353_24
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(33852..34697)
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HHP5_9CLOT
Inner membrane ABC transporter permease protein YcjP {ECO:0000313|EMBL:KJJ70108.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
ABC transporter permease
L2_059_000G1_scaffold_353_25
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34710..35645)
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HHP6_9CLOT
Lactose transport system permease protein LacF {ECO:0000313|EMBL:KJJ70109.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
transporter
L2_059_000G1_scaffold_353_26

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comp(35662..36687)
DNA (1026bp) protein (342aa)
alcohol dehydrogenase n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B32A8B
Alcohol dehydrogenase {ECO:0000313|EMBL:AHF25880.1}; TaxID=1393648 species="Bacteria; environmental samples.;" source="uncultured bacterium Contigcl_1523.;"
alcohol dehydrogenase
L2_059_000G1_scaffold_353_27
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

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36810..37868
DNA (1059bp) protein (353aa)
LysR substrate binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3N8_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:ETP73726.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
LysR family transcriptional regulator
L2_059_000G1_scaffold_353_28
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(38012..38254)
DNA (243bp) protein (81aa)
Transporter major facilitator family protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q089_9FIRM
Transporter major facilitator family protein {ECO:0000313|EMBL:CDC30093.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
major facilitator superfamily protein
L2_059_000G1_scaffold_353_29
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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38471..38815
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YDW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13782.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Cupin domain.
L2_059_000G1_scaffold_353_30
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(39053..40111)
DNA (1059bp) protein (353aa)
Ethanolamine utilization protein, EutH n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MIU7_9FIRM
Ethanolamine utilization protein, EutH {ECO:0000313|EMBL:EFV00972.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
ethanolamine utilization protein EutH
Displaying items 1-30 of 61 in total

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