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L2_059_000G1_scaffold_355

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_355_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..385
DNA (384bp) protein (128aa)
D-alanyl-D-alanine carboxypeptidase n=2 Tax=Roseburia intestinalis RepID=D4KQZ1_9FIRM
D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBL12066.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_355_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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504..926
DNA (423bp) protein (141aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GEA6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12065.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_355_3
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1065..1277)
DNA (213bp) protein (71aa)
Uncharacterized conserved protein n=4 Tax=Roseburia RepID=D4KQZ3_9FIRM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CDA55512.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_059_000G1_scaffold_355_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1414..2805
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GEA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99834.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_059_000G1_scaffold_355_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2821..3516
DNA (696bp) protein (232aa)
Pyridoxal phosphate enzyme, YggS family n=4 Tax=Roseburia RepID=D4KQZ4_9FIRM
pyridoxal phosphate enzyme, YggS family
Pyridoxal phosphate enzyme YggS family {ECO:0000313|EMBL:CDA55510.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_059_000G1_scaffold_355_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3521..4057
DNA (537bp) protein (179aa)
Cell division protein SepF n=4 Tax=Roseburia RepID=D4KQZ5_9FIRM
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_355_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4060..4812
DNA (753bp) protein (251aa)
S4 domain protein n=2 Tax=Roseburia RepID=C7GEB1_9FIRM
Putative S4 domain protein {ECO:0000313|EMBL:CDA55507.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Uncharacterized conserved protein, contains S4-like domain
L2_059_000G1_scaffold_355_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4854..5948
DNA (1095bp) protein (365aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=2 Tax=Roseburia RepID=R6B926_9FIRM
L2_059_000G1_scaffold_355_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5976..6500
DNA (525bp) protein (175aa)
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Lipoprotein signal peptidase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KXG8_9FIRM
L2_059_000G1_scaffold_355_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6543..7475
DNA (933bp) protein (311aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase, RluA family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GEB4_9FIRM
L2_059_000G1_scaffold_355_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7630..8259
DNA (630bp) protein (210aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GEB5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55502.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_059_000G1_scaffold_355_12
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8738..11488)
DNA (2751bp) protein (917aa)
dockerin type I cellulosome protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2F660
Ig domain-containing protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:ABN53027.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L2_059_000G1_scaffold_355_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11735..11875)
DNA (141bp) protein (47aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KR02_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09304.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_059_000G1_scaffold_355_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11872..12324)
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GEB9_9FIRM
L2_059_000G1_scaffold_355_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12275..12382)
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BQI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA55497.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_059_000G1_scaffold_355_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12548..13282
DNA (735bp) protein (245aa)
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B907_9FIRM
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control {ECO:0000313|EMBL:CDA55496.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
L2_059_000G1_scaffold_355_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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13316..14365
DNA (1050bp) protein (350aa)
Site-specific recombinase XerD n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KXG5_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CDA55495.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_059_000G1_scaffold_355_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14476..15201)
DNA (726bp) protein (242aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
Acyltransferase n=2 Tax=Roseburia RepID=C7GEC2_9FIRM
Acyltransferase {ECO:0000313|EMBL:EEU99848.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_059_000G1_scaffold_355_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15389..15721)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KR05_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09307.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_059_000G1_scaffold_355_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15938..16555
DNA (618bp) protein (206aa)
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
LexA repressor n=4 Tax=Roseburia RepID=D4KR06_9FIRM
L2_059_000G1_scaffold_355_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16643..16990)
DNA (348bp) protein (116aa)
Ribosomal silencing factor RsfS n=2 Tax=Roseburia RepID=C7G7T6_9FIRM
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
iojap-related protein
L2_059_000G1_scaffold_355_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17078..17656)
DNA (579bp) protein (193aa)
Hydrolase, HD family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G7T5_9FIRM
Hydrolase, HD family {ECO:0000313|EMBL:EEV02142.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
conserved hypothetical protein TIGR00488
L2_059_000G1_scaffold_355_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17738..18382)
DNA (645bp) protein (215aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244, ECO:0000313|EMBL:CBL12049.1};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KXF9_9FIRM
L2_059_000G1_scaffold_355_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18384..18716)
DNA (333bp) protein (111aa)
RNA-binding protein, YhbY family n=4 Tax=Roseburia RepID=C7G7T3_9FIRM
conserved hypothetical protein TIGR00253
Uncharacterized protein {ECO:0000313|EMBL:CBL09311.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_059_000G1_scaffold_355_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18738..20021)
DNA (1284bp) protein (428aa)
GTPase Obg n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KXF7_9FIRM
Obg family GTPase CgtA
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_355_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20197..20481)
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=4 Tax=Roseburia RepID=D4KR11_9FIRM
LSU ribosomal protein L27P
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_355_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20485..20814)
DNA (330bp) protein (110aa)
Predicted ribosomal protein n=2 Tax=Roseburia RepID=D4KXF5_9FIRM
Predicted ribosomal protein
Predicted ribosomal protein {ECO:0000313|EMBL:CBL12045.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_059_000G1_scaffold_355_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20833..21138)
DNA (306bp) protein (102aa)
50S ribosomal protein L21 n=4 Tax=Roseburia RepID=D4KR13_9FIRM
LSU ribosomal protein L21P
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_059_000G1_scaffold_355_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21299..22132)
DNA (834bp) protein (278aa)
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Undecaprenyl-diphosphatase n=2 Tax=Roseburia RepID=D4KR14_9FIRM
L2_059_000G1_scaffold_355_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22200..23456)
DNA (1257bp) protein (419aa)
Ribonucleases G and E (EC:3.1.26.-)
Ribonucleases G and E {ECO:0000313|EMBL:CBL09317.1}; EC=3.1.26.- {ECO:0000313|EMBL:CBL09317.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Ribonucleases G and E n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KR15_9FIRM
Displaying items 1-30 of 77 in total

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