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L2_059_000G1_scaffold_387

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_387_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

276..2150
DNA (1875bp) protein (625aa)
carbon monoxide dehydrogenase (EC:1.2.99.2)
Carbon-monoxide dehydrogenase, catalytic subunit n=7 Tax=Clostridium clostridioforme RepID=N9W8H2_9CLOT
Carbon-monoxide dehydrogenase, catalytic subunit {ECO:0000313|EMBL:ENZ17282.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_059_000G1_scaffold_387_2
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2147..3487
DNA (1341bp) protein (447aa)
periplasmic [Fe] hydrogenase 1 (EC:1.12.7.2)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KHU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61757.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L2_059_000G1_scaffold_387_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3591..4106)
DNA (516bp) protein (172aa)
ATP/cobalamin adenosyltransferase (EC:2.5.1.17)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8S5J6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP12476.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L2_059_000G1_scaffold_387_4
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4161..4706)
DNA (546bp) protein (182aa)
Carbon dioxide concentrating mechanism/carboxysome shell protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJ99_CLOSC
Carbon dioxide concentrating mechanism/carboxysome shell protein
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CBK77773.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_059_000G1_scaffold_387_5
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4769..6139)
DNA (1371bp) protein (457aa)
Predicted NADH:ubiquinone oxidoreductase, subunit RnfC n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJA0_CLOSC
Predicted NADH:ubiquinone oxidoreductase, subunit RnfC
Predicted NADH:ubiquinone oxidoreductase, subunit RnfC {ECO:0000313|EMBL:CBK77774.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_059_000G1_scaffold_387_6
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6418..6798
DNA (381bp) protein (127aa)
Ethanolamine utilization protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJA1_CLOSC
Ethanolamine utilization protein
Ethanolamine utilization protein {ECO:0000313|EMBL:CBK77775.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_059_000G1_scaffold_387_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6846..7316
DNA (471bp) protein (157aa)
Ethanolamine utilization protein n=9 Tax=Clostridium RepID=G5I3W1_9CLOT
Ethanolamine utilization protein, EutP {ECO:0000313|EMBL:ENZ17271.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ethanolamine utilization protein, EutP
L2_059_000G1_scaffold_387_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7313..7888
DNA (576bp) protein (192aa)
PfpI family intracellular protease n=8 Tax=Clostridium clostridioforme RepID=N9V041_9CLOT
PfpI family intracellular protease {ECO:0000313|EMBL:ENZ70118.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
PfpI family intracellular peptidase
L2_059_000G1_scaffold_387_9
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8043..10604
DNA (2562bp) protein (854aa)
glycerol dehydratase, cobalamin-independent, large subunit (EC:2.3.1.54 4.2.1.30)
Glycerol dehydratase, cobalamin-independent, large subunit {ECO:0000313|EMBL:CBK77776.1}; EC=2.3.1.54 {ECO:0000313|EMBL:CBK77776.1};; EC=4.2.1.30 {ECO:0000313|EMBL:CBK77776.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Glycerol dehydratase, cobalamin-independent, large subunit n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJA2_CLOSC
L2_059_000G1_scaffold_387_10
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10629..11546
DNA (918bp) protein (306aa)
glycerol dehydratase, cobalamin-independent, small subunit (EC:1.97.1.4 4.2.1.30)
Glycerol dehydratase, cobalamin-independent, small subunit {ECO:0000313|EMBL:CBK77777.1}; EC=1.97.1.4 {ECO:0000313|EMBL:CBK77777.1};; EC=4.2.1.30 {ECO:0000313|EMBL:CBK77777.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Glycerol dehydratase, cobalamin-independent, small subunit n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJA3_CLOSC
L2_059_000G1_scaffold_387_11
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11571..12362
DNA (792bp) protein (264aa)
Ethanolamine utilization protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJA4_CLOSC
Ethanolamine utilization protein
Ethanolamine utilization protein {ECO:0000313|EMBL:CBK77778.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_059_000G1_scaffold_387_12
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12427..12705
DNA (279bp) protein (93aa)
Carbon dioxide concentrating mechanism/carboxysome shell protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJA5_CLOSC
Carbon dioxide concentrating mechanism/carboxysome shell protein
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CBK77779.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_059_000G1_scaffold_387_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12790..13572
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0CJR6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP12486.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_059_000G1_scaffold_387_14
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13584..14156
DNA (573bp) protein (191aa)
Carbon dioxide concentrating mechanism/carboxysome shell protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJA7_CLOSC
Carbon dioxide concentrating mechanism/carboxysome shell protein
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CBK77781.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_059_000G1_scaffold_387_15
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14197..14460
DNA (264bp) protein (88aa)
Carbon dioxide concentrating mechanism/carboxysome shell protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJA8_CLOSC
Carbon dioxide concentrating mechanism/carboxysome shell protein
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CBK77782.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_059_000G1_scaffold_387_16
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14494..15807
DNA (1314bp) protein (438aa)
propionaldehyde dehydrogenase (EC:1.2.1.-)
Propionaldehyde dehydrogenase {ECO:0000313|EMBL:CBK77783.1}; EC=1.2.1.- {ECO:0000313|EMBL:CBK77783.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Propionaldehyde dehydrogenase n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJA9_CLOSC
L2_059_000G1_scaffold_387_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15822..17003
DNA (1182bp) protein (394aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
S-adenosylmethionine synthase n=1 Tax=Clostridium bolteae 90B8 RepID=N9YVH1_9CLOT
methionine adenosyltransferase
L2_059_000G1_scaffold_387_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17077..17355
DNA (279bp) protein (93aa)
Uncharacterized protein n=13 Tax=Clostridium RepID=A8S5L3_9CLOT
Propanediol utilization protein PduA {ECO:0000313|EMBL:ENZ31580.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L2_059_000G1_scaffold_387_19
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17425..18066
DNA (642bp) protein (214aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Phosphate propanoyltransferase n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJB1_CLOSC
Propanediol utilization protein
L2_059_000G1_scaffold_387_20
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18087..18899
DNA (813bp) protein (271aa)
Ethanolamine utilization protein EutJ family protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJB2_CLOSC
ethanolamine utilization protein EutJ family protein
Ethanolamine utilization protein EutJ family protein {ECO:0000313|EMBL:CBK77786.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_059_000G1_scaffold_387_21
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18937..20352
DNA (1416bp) protein (472aa)
NAD-dependent aldehyde dehydrogenases n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJB3_CLOSC
NAD-dependent aldehyde dehydrogenases
NAD-dependent aldehyde dehydrogenases {ECO:0000313|EMBL:CBK77787.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_059_000G1_scaffold_387_22
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20388..21503
DNA (1116bp) protein (372aa)
Alcohol dehydrogenase, class IV n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJB4_CLOSC
Alcohol dehydrogenase, class IV
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:CBK77788.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_059_000G1_scaffold_387_23
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21614..22945
DNA (1332bp) protein (444aa)
Predicted sensor domain n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJB5_CLOSC
Predicted sensor domain
Predicted sensor domain {ECO:0000313|EMBL:CBK77789.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_059_000G1_scaffold_387_24
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22949..23974
DNA (1026bp) protein (342aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJB6_CLOSC
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBK77790.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_059_000G1_scaffold_387_25
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24009..24722
DNA (714bp) protein (238aa)
Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DJB7_CLOSC
Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)
Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) {ECO:0000313|EMBL:CBK77791.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_059_000G1_scaffold_387_26
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25016..25486
DNA (471bp) protein (157aa)
YbaK/proline--tRNA ligase associated domain-containing protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N334_9CLOT
YbaK/proline--tRNA ligase associated domain-containing protein
YbaK/proline--tRNA ligase associated domain-containing protein {ECO:0000313|EMBL:AGF57847.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_059_000G1_scaffold_387_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25715..26692
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AN33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43992.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_059_000G1_scaffold_387_28
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27277..29688
DNA (2412bp) protein (804aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCX2_9CLOT
L2_059_000G1_scaffold_387_29
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29986..30960)
DNA (975bp) protein (325aa)
Predicted dehydrogenases and related proteins n=1 Tax=Dorea sp. CAG:317 RepID=R6WTQ6_9FIRM
Predicted dehydrogenases and related proteins {ECO:0000313|EMBL:CDD07381.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
oxidoreductase
L2_059_000G1_scaffold_387_30
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31203..31847
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AN28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43987.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
Displaying items 1-30 of 67 in total

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