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L2_059_000G1_scaffold_402

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_402_1
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..142
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J2A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28181.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
L2_059_000G1_scaffold_402_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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498..1802
DNA (1305bp) protein (435aa)
GBSi1 group II intron maturase n=2 Tax=root RepID=R5VEY3_9FIRM
GBSi1 group II intron maturase {ECO:0000313|EMBL:CCZ79297.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
reverse transcriptase
L2_059_000G1_scaffold_402_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2286..6839
DNA (4554bp) protein (1518aa)
Glutamate synthase domain 2 (EC:1.4.1.13 1.4.1.14)
Glutamate synthase domain 2 n=1 Tax=Roseburia sp. CAG:18 RepID=R5V754_9FIRM
Glutamate synthase domain 2 {ECO:0000313|EMBL:CCZ79296.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_000G1_scaffold_402_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6854..8347
DNA (1494bp) protein (498aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.14 1.4.1.13)
Glutamate synthase (NADH) small subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMI5_9FIRM
Glutamate synthase (NADH) small subunit {ECO:0000313|EMBL:CCZ79295.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_000G1_scaffold_402_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8693..9952
DNA (1260bp) protein (420aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUA7_9FIRM
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:CCZ79294.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
methyl-accepting chemotaxis sensory transducer
L2_059_000G1_scaffold_402_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9997..10455
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79293.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_000G1_scaffold_402_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10515..11540
DNA (1026bp) protein (342aa)
Acyltransferase 3 n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEX8_9FIRM
Acyltransferase 3 {ECO:0000313|EMBL:CCZ79292.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
acyltransferase
L2_059_000G1_scaffold_402_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11614..11718
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V750_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79291.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_000G1_scaffold_402_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11800..12603
DNA (804bp) protein (268aa)
Hemerythrin n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMI1_9FIRM
Hemerythrin {ECO:0000313|EMBL:CCZ79290.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hemerythrin
L2_059_000G1_scaffold_402_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12748..13500
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79289.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_402_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13519..14844
DNA (1326bp) protein (442aa)
Uncharacterized protein n=2 Tax=root RepID=R5ULV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79288.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_402_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15058..16395
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79287.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative efflux protein, MATE family
L2_059_000G1_scaffold_402_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16465..17022
DNA (558bp) protein (186aa)
Putative dihydroxyacetone kinase regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5V745_9FIRM
Putative dihydroxyacetone kinase regulator {ECO:0000313|EMBL:CCZ79286.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator DhaS
L2_059_000G1_scaffold_402_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17183..18559
DNA (1377bp) protein (459aa)
Radical SAM domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMH6_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CCZ79285.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted Fe-S oxidoreductases
L2_059_000G1_scaffold_402_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18778..19107
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79284.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_402_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19171..21291
DNA (2121bp) protein (707aa)
Heavy metal translocating P-type ATPase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULU9_9FIRM
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CCZ79283.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase
L2_059_000G1_scaffold_402_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21352..22620
DNA (1269bp) protein (423aa)
Predicted carboxypeptidase (EC:3.4.19.11)
Predicted carboxypeptidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEW7_9FIRM
Predicted carboxypeptidase {ECO:0000313|EMBL:CCZ79282.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_000G1_scaffold_402_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22631..23347)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V741_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79281.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_402_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23602..25386
DNA (1785bp) protein (595aa)
Methyl-accepting chemotaxis protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMH2_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CCZ79280.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Methyl-accepting chemotaxis protein
L2_059_000G1_scaffold_402_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25564..26493
DNA (930bp) protein (310aa)
Bacitracin transport ATP-binding protein BcrA n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU92_9FIRM
Bacitracin transport ATP-binding protein BcrA {ECO:0000313|EMBL:CCZ79279.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
multidrug ABC transporter ATPase
L2_059_000G1_scaffold_402_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26493..28658
DNA (2166bp) protein (722aa)
ABC-type transport system involved in multi-copper enzyme maturation permease component n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULU6_9FIRM
ABC-type transport system involved in multi-copper enzyme maturation permease component {ECO:0000313|EMBL:CCZ79278.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type transport system involved in multi-copper enzyme maturation, permease component
L2_059_000G1_scaffold_402_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28662..28871
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79277.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_000G1_scaffold_402_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28872..29069)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V737_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79276.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_402_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29248..29754
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79275.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_402_25
unknown

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29693..29881
DNA (189bp) protein (63aa)

This feature has no annotations

L2_059_000G1_scaffold_402_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29940..31145
DNA (1206bp) protein (402aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULU0_9FIRM
L2_059_000G1_scaffold_402_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31382..31813
DNA (432bp) protein (144aa)
Protein MraZ n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEV6_9FIRM
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
mraZ protein
L2_059_000G1_scaffold_402_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31816..32781
DNA (966bp) protein (322aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Roseburia sp. CAG:18 RepID=R5V731_9FIRM
L2_059_000G1_scaffold_402_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32778..33251
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79270.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_402_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33264..35222
DNA (1959bp) protein (653aa)
Peptidoglycan glycosyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU84_9FIRM
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:CCZ79269.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
peptidoglycan glycosyltransferase
Displaying items 1-30 of 57 in total

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