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L2_059_000G1_scaffold_420

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_420_1
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3..422
DNA (420bp) protein (140aa)
membrane protein n=1 Tax=Sporolactobacillus inulinus RepID=UPI000255C2C2
UPF0597 protein P343_09800 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1395513 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; Sporolactobacillus.;" source="Sporolactobacillus laevolacticus DSM 442.;"
hypothetical protein
L2_059_000G1_scaffold_420_2
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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533..1180
DNA (648bp) protein (216aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BXH1_9CLOT
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEG75278.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
transcriptional regulator
L2_059_000G1_scaffold_420_3
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1280..2239
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JGH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY53678.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
hypothetical protein
L2_059_000G1_scaffold_420_4
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2354..3652
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00035E641C
multi antimicrobial extrusion protein MatE
Multi antimicrobial extrusion protein MatE {ECO:0000313|EMBL:ADL04964.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_059_000G1_scaffold_420_5
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3743..4456
DNA (714bp) protein (238aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BBS8_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:ERI69263.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Response regulator of the LytR/AlgR family
L2_059_000G1_scaffold_420_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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4456..5730
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X748_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY91718.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
sensor kinase protein
L2_059_000G1_scaffold_420_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5727..8240)
DNA (2514bp) protein (838aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036DCBA3
Excinuclease ABC subunit A {ECO:0000313|EMBL:ENY97982.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ABC transporter
L2_059_000G1_scaffold_420_8
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8361..8897
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CPN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI69261.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L2_059_000G1_scaffold_420_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8936..9616
DNA (681bp) protein (227aa)
Pentapeptide repeat protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJV5_CLOSV
Pentapeptide repeat protein {ECO:0000313|EMBL:EDS05182.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_059_000G1_scaffold_420_10
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9626..10111
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KW65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33374.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
WecD; histone acetyltransferase HPA2
L2_059_000G1_scaffold_420_11
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10189..11019)
DNA (831bp) protein (277aa)
Methyltransferase domain protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH76_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EDR96215.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
hypothetical protein
L2_059_000G1_scaffold_420_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11348..12694
DNA (1347bp) protein (449aa)
multidrug transporter MatE n=1 Tax=Blautia producta RepID=UPI00036CA46D
Putative MATE efflux family protein {ECO:0000313|EMBL:EGB94893.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
MATE efflux family protein
L2_059_000G1_scaffold_420_13
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12699..13586)
DNA (888bp) protein (296aa)
LysR substrate binding domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJV3_CLOSV
LysR substrate binding domain protein {ECO:0000313|EMBL:EDS05180.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Transcriptional regulator
L2_059_000G1_scaffold_420_14
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13728..15191
DNA (1464bp) protein (488aa)
Transporter n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJV2_CLOSV
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
sodium:neurotransmitter symporter
L2_059_000G1_scaffold_420_15
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15471..16271
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EK06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97674.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L2_059_000G1_scaffold_420_16
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16328..17197)
DNA (870bp) protein (290aa)
LysR substrate binding domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C387_9CLOT
LysR substrate binding domain protein {ECO:0000313|EMBL:EEG73263.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
LysR family transcriptional regulator
L2_059_000G1_scaffold_420_17
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17425..19095
DNA (1671bp) protein (557aa)
Dihydroxy-acid dehydratase (EC:4.2.1.9)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WGU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08595.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L2_059_000G1_scaffold_420_18
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19117..19980
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037255DB
Uncharacterized protein {ECO:0000313|EMBL:EEG72236.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
integral membrane protein
L2_059_000G1_scaffold_420_19
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20058..21044
DNA (987bp) protein (329aa)
ornithine cyclodeaminase (EC:4.3.1.12)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WP17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08594.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L2_059_000G1_scaffold_420_20
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21085..21297
DNA (213bp) protein (71aa)
Tautomerase enzyme n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1U2_9CLOT
Tautomerase enzyme {ECO:0000313|EMBL:EEG74106.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
4-oxalocrotonate tautomerase
L2_059_000G1_scaffold_420_21
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21739..23037
DNA (1299bp) protein (433aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C029_9CLOT
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EEG74757.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L2_059_000G1_scaffold_420_22
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23320..25035
DNA (1716bp) protein (572aa)
Putative regulator of cell autolysis (EC:2.7.13.3)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KV85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34854.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_059_000G1_scaffold_420_23
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25016..25747
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KV84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34853.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
putative LytT family two-component response regulator
L2_059_000G1_scaffold_420_24
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25819..26181
DNA (363bp) protein (121aa)
TIGR00266 family protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJV0_CLOSV
TIGR00266 family protein {ECO:0000313|EMBL:EDS05177.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
conserved hypothetical protein TIGR00266
L2_059_000G1_scaffold_420_25
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26109..26660)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KV81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34850.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
AraC family transcriptional regulator
L2_059_000G1_scaffold_420_26
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26804..27970
DNA (1167bp) protein (389aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
galactokinase (EC:2.7.1.6)
Galactokinase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KV80_9FIRM
L2_059_000G1_scaffold_420_27
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28000..29490
DNA (1491bp) protein (497aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=2 Tax=Clostridiales RepID=B0NJU6_CLOSV
L2_059_000G1_scaffold_420_28
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29583..30731)
DNA (1149bp) protein (383aa)
Lactaldehyde reductase n=1 Tax=Clostridium sp. D5 RepID=F0YYL1_9CLOT
Lactaldehyde reductase {ECO:0000313|EMBL:EGB93313.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L-1,2-propanediol oxidoreductase
L2_059_000G1_scaffold_420_29
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30864..31415)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YYL0_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93312.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
transcriptional regulator
L2_059_000G1_scaffold_420_30
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31573..32841
DNA (1269bp) protein (423aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJU4_CLOSV
Displaying items 1-30 of 60 in total

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