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L2_059_000G1_scaffold_433

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_000G1_scaffold_433_1
unknown

Not on your lists

comp(206..331)
DNA (126bp) protein (42aa)

This feature has no annotations

L2_059_000G1_scaffold_433_2
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(350..520)
DNA (171bp) protein (57aa)
Uncharacterized protein n=8 Tax=root RepID=D4S2G1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK83062.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L2_059_000G1_scaffold_433_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(843..1022)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79930.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_000G1_scaffold_433_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1054..2097)
DNA (1044bp) protein (348aa)
Monosaccharide ABC transporter substrate-binding protein CUT2 family (TC 3.A.1.2.-) n=1 Tax=Roseburia sp. CAG:18 RepID=R5UW27_9FIRM
Monosaccharide ABC transporter substrate-binding protein CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CCZ79924.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L2_059_000G1_scaffold_433_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2112..3080)
DNA (969bp) protein (323aa)
Sugar-binding domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNR3_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:CCZ79923.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type sugar transport system, periplasmic component
L2_059_000G1_scaffold_433_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3082..4887)
DNA (1806bp) protein (602aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VGN4_9FIRM
L2_059_000G1_scaffold_433_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4868..6472)
DNA (1605bp) protein (535aa)
Two-component response regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8Z2_9FIRM
Two-component response regulator {ECO:0000313|EMBL:CCZ79921.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
two component transcriptional regulator, AraC family
L2_059_000G1_scaffold_433_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6615..8261)
DNA (1647bp) protein (549aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPB0_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CCZ79920.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L2_059_000G1_scaffold_433_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8277..9785)
DNA (1509bp) protein (503aa)
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
ABC transporter ATP-binding protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UW20_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ79919.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_059_000G1_scaffold_433_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9853..11148)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79918.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
galactose/glucose-binding lipoprotein
L2_059_000G1_scaffold_433_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11382..11873)
DNA (492bp) protein (164aa)
G:T/U mismatch-specific DNA glycosylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VGM9_9FIRM
G:T/U mismatch-specific DNA glycosylase {ECO:0000313|EMBL:CCZ79917.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
G:T/U mismatch-specific DNA glycosylase
L2_059_000G1_scaffold_433_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11915..12808)
DNA (894bp) protein (298aa)
Antioxidant AhpC/TSA family n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8Y7_9FIRM
Antioxidant AhpC/TSA family {ECO:0000313|EMBL:CCZ79916.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Thiol-disulfide isomerase and thioredoxins
L2_059_000G1_scaffold_433_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12810..13640)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78228.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_433_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13695..13841)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UW16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79914.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_433_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14027..14449)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8X9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79911.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_433_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14689..15348
DNA (660bp) protein (220aa)
Putative transcriptional regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPA1_9FIRM
Putative transcriptional regulator {ECO:0000313|EMBL:CCZ79910.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative transcriptional regulator
L2_059_000G1_scaffold_433_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15408..18614)
DNA (3207bp) protein (1069aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbamoyl-phosphate synthase, large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Roseburia sp. CAG:18 RepID=R5UW11_9FIRM
L2_059_000G1_scaffold_433_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18614..19684)
DNA (1071bp) protein (357aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNP9_9FIRM
carbamoyl phosphate synthase small subunit
L2_059_000G1_scaffold_433_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19852..20436)
DNA (585bp) protein (195aa)
Acetyltransferases n=1 Tax=Roseburia sp. CAG:18 RepID=R5VGL9_9FIRM
Acetyltransferases {ECO:0000313|EMBL:CCZ79907.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_433_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20437..22662)
DNA (2226bp) protein (742aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Helicase RecD/TraA family n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8X4_9FIRM
helicase, RecD/TraA family
L2_059_000G1_scaffold_433_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22734..23081)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79905.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_433_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23120..23938)
DNA (819bp) protein (273aa)
Fagellar hook-basal body proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5UW06_9FIRM
Fagellar hook-basal body proteins {ECO:0000313|EMBL:CCZ79904.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
fagellar hook-basal body proteins
L2_059_000G1_scaffold_433_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23976..24776)
DNA (801bp) protein (267aa)
Flagellar basal body and hook protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNP4_9FIRM
Flagellar basal body and hook protein {ECO:0000313|EMBL:CCZ79903.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
fagellar hook-basal body proteins
L2_059_000G1_scaffold_433_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24880..25875)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VGL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79902.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
rod shape-determining protein MreB
L2_059_000G1_scaffold_433_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26094..28940)
DNA (2847bp) protein (949aa)
UvrABC system protein A n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8X0_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
excinuclease ABC, A subunit
L2_059_000G1_scaffold_433_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28960..30945)
DNA (1986bp) protein (662aa)
UvrABC system protein B n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP90_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
excinuclease ABC, B subunit
L2_059_000G1_scaffold_433_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31165..32175
DNA (1011bp) protein (337aa)
Polysaccharide deacetylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UW01_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CCZ79899.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted xylanase/chitin deacetylase
L2_059_000G1_scaffold_433_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32237..34810)
DNA (2574bp) protein (858aa)
Protein translocase subunit SecA n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNN7_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
preprotein translocase subunit SecA
L2_059_000G1_scaffold_433_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35018..35278
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VGL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79897.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_059_000G1_scaffold_433_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35334..35915)
DNA (582bp) protein (194aa)
Dipicolinate synthase subunit B n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8W4_9FIRM
Dipicolinate synthase subunit B {ECO:0000313|EMBL:CCZ79896.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
spoVFB; dipicolinate synthase subunit B
Displaying items 1-30 of 55 in total

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